Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014318.1-P | Field mustard | cytosol | 63.85 | 88.3 |
| CDY02551 | Canola | cytosol | 63.85 | 88.3 |
| AT1G52245.1 | Thale cress | cytosol | 60.0 | 82.98 |
| GSMUA_Achr2P19900_001 | Banana | cytosol | 54.62 | 76.34 |
| Solyc12g044240.1.1 | Tomato | cytosol | 54.62 | 75.53 |
| PGSC0003DMT400019607 | Potato | cytosol | 53.85 | 74.47 |
| GSMUA_Achr10P... | Banana | cytosol | 52.31 | 73.12 |
| VIT_09s0002g04280.t01 | Wine grape | cytosol | 53.08 | 72.63 |
| CDX97722 | Canola | cytosol | 51.54 | 72.04 |
| CDY30135 | Canola | cytosol | 50.77 | 70.97 |
| GSMUA_Achr7P25190_001 | Banana | cytosol | 50.0 | 69.89 |
| GSMUA_Achr7P14400_001 | Banana | cytosol | 50.0 | 69.89 |
| KRH09878 | Soybean | cytosol | 50.77 | 69.47 |
| KRH23441 | Soybean | cytosol | 50.0 | 68.42 |
| Solyc03g120690.2.1 | Tomato | cytosol | 49.23 | 68.09 |
| PGSC0003DMT400006527 | Potato | cytosol | 48.46 | 67.02 |
| KXG33416 | Sorghum | cytosol | 47.69 | 66.67 |
| Zm00001d043386_P001 | Maize | cytosol | 47.69 | 66.67 |
| GSMUA_Achr10P... | Banana | cytosol | 49.23 | 62.75 |
| TraesCS3D01G296300.1 | Wheat | cytosol | 46.92 | 61.62 |
| TraesCS3B01G330900.1 | Wheat | cytosol | 46.15 | 60.61 |
| TraesCS3A01G305600.1 | Wheat | cytosol | 46.15 | 60.61 |
| Os02t0269200-01 | Rice | cytosol | 46.15 | 60.61 |
| TraesCS1B01G110900.1 | Wheat | cytosol | 45.38 | 59.6 |
| TraesCS1D01G203800.1 | Wheat | cytosol | 45.38 | 59.6 |
| HORVU3Hr1G073190.1 | Barley | cytosol | 46.92 | 58.65 |
| TraesCS2B01G143000.1 | Wheat | cytosol | 44.62 | 58.59 |
| TraesCS2A01G245600.1 | Wheat | cytosol | 44.62 | 58.59 |
| TraesCS2B01G427400.1 | Wheat | cytosol | 43.85 | 57.58 |
| EES06648 | Sorghum | cytosol | 43.85 | 57.58 |
| TraesCS7A01G284100.1 | Wheat | cytosol, plastid | 38.46 | 57.47 |
| TraesCS7A01G061500.1 | Wheat | cytosol | 46.15 | 57.14 |
| TraesCS4A01G427300.1 | Wheat | cytosol | 46.15 | 57.14 |
| TraesCS5B01G340700.1 | Wheat | cytosol | 43.08 | 56.57 |
| TraesCS7D01G056400.1 | Wheat | cytosol | 45.38 | 56.19 |
| Zm00001d016016_P001 | Maize | cytosol | 46.15 | 50.0 |
| TraesCS4A01G428300.1 | Wheat | cytosol | 46.15 | 44.78 |
| CDX89255 | Canola | cytosol | 33.08 | 42.57 |
| CDY29301 | Canola | cytosol | 33.08 | 42.57 |
| HORVU7Hr1G011400.2 | Barley | plastid | 48.46 | 38.89 |
| CDX90554 | Canola | cytosol | 25.38 | 27.27 |
| CDY09728 | Canola | cytosol | 25.38 | 27.27 |
| CDY57865 | Canola | cytosol | 25.38 | 27.05 |
| CDY24919 | Canola | cytosol | 25.38 | 26.61 |
| CDY04736 | Canola | cytosol | 26.15 | 26.15 |
| CDY21425 | Canola | cytosol | 26.15 | 26.15 |
| CDY12479 | Canola | cytosol | 26.92 | 25.55 |
| CDY25775 | Canola | cytosol | 26.92 | 25.55 |
| CDX91705 | Canola | cytosol | 25.38 | 25.38 |
| CDY41457 | Canola | cytosol | 25.38 | 25.38 |
| CDX88858 | Canola | nucleus, plastid | 28.46 | 17.7 |
| CDX70914 | Canola | nucleus | 28.46 | 17.54 |
| CDY45106 | Canola | nucleus | 27.69 | 17.14 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.2 | GO:A0A078IEH4 | UniProt:A0A078IEH4 | EnsemblPlants:CDY47528 | ProteinID:CDY47528 |
| ProteinID:CDY47528.1 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005874 |
| GO:GO:0007017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0030286 | EnsemblPlantsGene:GSBRNA2T00087590001 |
| InterPro:IPR037177 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF47 | SMART:SM01375 | SUPFAM:SSF54648 |
| UniParc:UPI0004EF29B6 | SEG:seg | : | : | : | : |
Description
BnaC03g69340DBnaC03g69340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEH4]
Coordinates
chrLK032720:-:11497..16062
Molecular Weight (calculated)
14504.9 Da
IEP (calculated)
5.157
GRAVY (calculated)
-0.325
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRYSYSQPS SSEEYDVDIT SLLQAEADLY SDDADKDVGR KSNGGRFRYA SKMQVQAMSL ASQALDIFDV VDCKSIAGHI KKEFDERYGS GWQCVVGSNF
101: GCFFTHSKGT FIYFQLETLK FLIFKGASAP
101: GCFFTHSKGT FIYFQLETLK FLIFKGASAP
1: MLEGKAMVED SDMPVKMQMQ AMAFASQALD LFDVFDCKSI AGHIKKEFDE RYGSGWQCVV GSNFGCFFTH SKGTFIYFQL ETLKFLIFKG ASTP
Arabidopsis Description
At1g52250 [Source:UniProtKB/TrEMBL;Acc:Q9M810]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.