Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400036771 | Potato | nucleus | 96.91 | 96.42 |
| PGSC0003DMT400054245 | Potato | mitochondrion | 12.52 | 92.41 |
| CDY15727 | Canola | nucleus | 63.29 | 71.1 |
| CDY03901 | Canola | nucleus | 63.46 | 71.02 |
| Bra030030.1-P | Field mustard | nucleus | 63.12 | 70.91 |
| AT1G24290.1 | Thale cress | nucleus | 62.09 | 68.95 |
| VIT_03s0017g02320.t01 | Wine grape | nucleus | 64.15 | 68.25 |
| KRH14043 | Soybean | cytosol | 62.61 | 68.22 |
| GSMUA_Achr3P23690_001 | Banana | nucleus | 42.37 | 61.6 |
Protein Annotations
| Gene3D:1.10.3710.10 | Gene3D:1.10.8.10 | Gene3D:1.10.8.60 | Gene3D:1.20.272.10 | Gene3D:3.40.50.300 | MapMan:35.2 |
| InterPro:AAA+_ATPase | InterPro:AAA_assoc_2 | InterPro:ATPase_AAA_core | ncoils:Coil | InterPro:DNA_pol3_clamp-load_cplx_C | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006260 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR015940 | UniProt:K4BLY3 | InterPro:MgsA_C | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF00627 | PFAM:PF12002 | PFAM:PF16193 | PFscan:PS50030 | PANTHER:PTHR13779 | PANTHER:PTHR13779:SF7 |
| SMART:SM00165 | SMART:SM00382 | SUPFAM:SSF46934 | SUPFAM:SSF48019 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc03g118320.1 |
| EnsemblPlants:Solyc03g118320.1.1 | InterPro:UBA | InterPro:UBA-like_sf | UniParc:UPI0002767C33 | SEG:seg | : |
Description
No Description!
Coordinates
chr3:+:67235471..67237222
Molecular Weight (calculated)
63814.1 Da
IEP (calculated)
6.966
GRAVY (calculated)
-0.329
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQQLVSMG FSEDIAVEAL TATGGDIIKA TEWILSHGHN HKGSQDSCNF NPISSSSSGS PTTAAHDYHP FQPKIDRFFQ FQSKPLTPTS VSVVKPIKGV
101: TTHEEEEGKI DEEPPLLRLT KRPKVVESEQ GKKRPPHEPL SERMRPRTLD DVVGQDHLLA PKSLLRSAID CGRLPSILLW GPPGTGKTSI ARAIVNTCSA
201: SEAGGSTYRF VSLSAVTSGV KDVREAVDEA RRMKKKSNKR TILFIDEVHR FNKAQQDSFL PVIEDGSVIF MGATTENPSF HLITPLLSRC RVLTLNPLKP
301: HHIAMLLRRA AADSDKGLSC CMGESMKIEV NDECIEFLST NCDGDARVAL NALEISATTA AARMGMARGS NKESGDKQGN ADESPLPAVV SLDDVKEAMQ
401: CKHLAYDRAG DEHYNLISAL HKSMRGSDAN ASIYWLARML EGGEEPLYIA RRLVRFASED VGLADPSALG QAVACYQACH FIGMPECNVI LAQCVAYLAL
501: APKSIAVYRA MRAAQKVVRE SVGQNEGVPL HLRNAPTKLM KDLNYGRDYI YPPDNPNSSQ TYLPLSLQGY KFLDWPNIAA NDQ
101: TTHEEEEGKI DEEPPLLRLT KRPKVVESEQ GKKRPPHEPL SERMRPRTLD DVVGQDHLLA PKSLLRSAID CGRLPSILLW GPPGTGKTSI ARAIVNTCSA
201: SEAGGSTYRF VSLSAVTSGV KDVREAVDEA RRMKKKSNKR TILFIDEVHR FNKAQQDSFL PVIEDGSVIF MGATTENPSF HLITPLLSRC RVLTLNPLKP
301: HHIAMLLRRA AADSDKGLSC CMGESMKIEV NDECIEFLST NCDGDARVAL NALEISATTA AARMGMARGS NKESGDKQGN ADESPLPAVV SLDDVKEAMQ
401: CKHLAYDRAG DEHYNLISAL HKSMRGSDAN ASIYWLARML EGGEEPLYIA RRLVRFASED VGLADPSALG QAVACYQACH FIGMPECNVI LAQCVAYLAL
501: APKSIAVYRA MRAAQKVVRE SVGQNEGVPL HLRNAPTKLM KDLNYGRDYI YPPDNPNSSQ TYLPLSLQGY KFLDWPNIAA NDQ
001: MEQLVSMGFS SDLAAEALTA TGGDSIQKAT DWILSHRSSP QSTATLQPKL DRFLRLHPKA LAPAMGDDSS KRPNPKTQIH VAADDSNKRH KLSSSSHRQH
101: QPLSERMRPR TLDDVVGQDH LLSPSSLLRS AVESNRLPSI VFWGPPGTGK TSIAKSLINS SKDPSLYRFV SLSAVTSGVK DVRDAVESAK RLNLEGRKRT
201: VLFMDEVHRF NKSQQDTFLP VIEDGSILFI GATTENPSFH LITPLLSRCR VLTLNPLKPN HVETLLRRAV DDSERGLPNS VEVDDSVIEF LANNCDGDAR
301: VALNALEISA TMATTRAGTD AVVSIDDAKE ALQCKHLAYD KAGEQHYNLI SALHKSMRGG DANAAIYWLA RMLEGGEEPL YIARRLIRFA SEDIGLADPS
401: ALTQAVACYQ ASHFLGMPEC NVILAQCTAY LALAPKSIAV YRAIGAAQKV VKDSVGQNEG VPLHLRNAPT KLMKELGYGK EYIYPPSDPS SAAGQTYLPP
501: SLLHHKFLEW PEGASGDFQD QEHRL
101: QPLSERMRPR TLDDVVGQDH LLSPSSLLRS AVESNRLPSI VFWGPPGTGK TSIAKSLINS SKDPSLYRFV SLSAVTSGVK DVRDAVESAK RLNLEGRKRT
201: VLFMDEVHRF NKSQQDTFLP VIEDGSILFI GATTENPSFH LITPLLSRCR VLTLNPLKPN HVETLLRRAV DDSERGLPNS VEVDDSVIEF LANNCDGDAR
301: VALNALEISA TMATTRAGTD AVVSIDDAKE ALQCKHLAYD KAGEQHYNLI SALHKSMRGG DANAAIYWLA RMLEGGEEPL YIARRLIRFA SEDIGLADPS
401: ALTQAVACYQ ASHFLGMPEC NVILAQCTAY LALAPKSIAV YRAIGAAQKV VKDSVGQNEG VPLHLRNAPT KLMKELGYGK EYIYPPSDPS SAAGQTYLPP
501: SLLHHKFLEW PEGASGDFQD QEHRL
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:O48696]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.