Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057242 | Potato | nucleus | 92.94 | 97.67 |
| VIT_19s0027g00600.t01 | Wine grape | cytosol | 80.85 | 80.2 |
| AT3G12940.2 | Thale cress | nucleus | 71.57 | 72.45 |
| KRH13671 | Soybean | cytosol | 61.09 | 71.29 |
| KRH43789 | Soybean | nucleus | 72.38 | 71.23 |
| CDY23555 | Canola | nucleus | 66.73 | 71.18 |
| Bra034715.1-P | Field mustard | nucleus | 66.53 | 71.12 |
| CDY60118 | Canola | nucleus | 66.33 | 70.91 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, peroxisome | 67.14 | 70.4 |
| OQU89978 | Sorghum | cytosol, nucleus, peroxisome | 60.28 | 63.21 |
| TraesCS2D01G235000.1 | Wheat | cytosol | 57.46 | 59.25 |
| TraesCS2B01G252300.1 | Wheat | cytosol | 57.06 | 58.84 |
| Zm00001d006430_P001 | Maize | cytosol | 60.28 | 57.72 |
| Os07t0496900-02 | Rice | nucleus | 57.66 | 55.64 |
| Zm00001d021542_P001 | Maize | cytosol | 25.4 | 47.55 |
| Solyc04g009340.2.1 | Tomato | nucleus | 25.81 | 22.78 |
| Solyc05g052220.2.1 | Tomato | nucleus | 8.67 | 10.31 |
Protein Annotations
| EnsemblPlants:Solyc07g066450.2.1 | EnsemblPlantsGene:Solyc07g066450.2 | Gene3D:2.60.120.330 | InterPro:IPNS-like | InterPro:IPR027443 | PANTHER:PTHR33644 |
| PANTHER:PTHR33644:SF2 | SEG:seg | SUPFAM:SSF51197 | UniParc:UPI000276B48E | UniProt:K4CHX0 | MapMan:35.2 |
Description
No Description!
Coordinates
chr7:+:67880848..67884670
Molecular Weight (calculated)
55174.4 Da
IEP (calculated)
6.637
GRAVY (calculated)
-0.399
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNGLPALG RVKLSDLVPL EGLPSDSYKL SVSTLSQSLA QYSAAIIQLS TSDGALLRSS LESARLYFQH KPSYPAADVI HSDDSQEWCK TSGYHADPQQ
101: WQETYDFRPG LTPSEPTTEI EFPPAGLADI FSLLGRAARD ILDAISFYLN LRSSPFTEIL DNVPLRNRET SSSVLSVCCH SRPSFQGAQH HGLTTQEDGH
201: LGMFSDHEHQ VDRSLVTIVK SDRPGLHVRD FHGHWVLVDG DLGPQEAIVY PGLALYQATA GYISPALHRT DIGNQQGSIY GRCSLSFKLM PKSMTNLNCS
301: EMRAAGHGVE AQFQLPVPVD DFMQRSTDQL LNRSNFPTFN FPTVQDGSMK PMMRRRKSNS RSKPLPPSKR LRLEAQRVLK ERVQDIADKK GIKLRFCTLK
401: DCESHIQSLD SPCTNIRMEI GWPPGVPFVH PHDLPNKAKI GFLETYEPGW SATHDMELSL IDPGQPSQHT SNLGIYVAIR MLPDECLDSL YQYLSA
101: WQETYDFRPG LTPSEPTTEI EFPPAGLADI FSLLGRAARD ILDAISFYLN LRSSPFTEIL DNVPLRNRET SSSVLSVCCH SRPSFQGAQH HGLTTQEDGH
201: LGMFSDHEHQ VDRSLVTIVK SDRPGLHVRD FHGHWVLVDG DLGPQEAIVY PGLALYQATA GYISPALHRT DIGNQQGSIY GRCSLSFKLM PKSMTNLNCS
301: EMRAAGHGVE AQFQLPVPVD DFMQRSTDQL LNRSNFPTFN FPTVQDGSMK PMMRRRKSNS RSKPLPPSKR LRLEAQRVLK ERVQDIADKK GIKLRFCTLK
401: DCESHIQSLD SPCTNIRMEI GWPPGVPFVH PHDLPNKAKI GFLETYEPGW SATHDMELSL IDPGQPSQHT SNLGIYVAIR MLPDECLDSL YQYLSA
001: MMAGNGMPTL GRVKVCDLVP SEGLPSDSYK LAVTTLSQSL AQYSAAIIQF PASDGALLRS GLDSARLYFH QRDSYPATNN MIHTNDSQEW CKTSGYYADP
101: QSWQESYEYR PGLTPTEPSN SMEFPPAGLP DIFALLGKAA RVVLDAIGFY LNLRSCPFTE ILDNVPLRNC EVSSSVLSVC CYARPSFHGA QHHSLTEDEQ
201: LILYSDHDHQ LDKSLISFVK SDKAGLHIRD MHGQWILVDV DLGPQEAVVY PGLALYQATA GYVSPAVHRT DLNSLQGSIE GRFSLAFKLM PKSMTNLSCS
301: EMRAAGHGVE AQFQLPVSVD DFMQRSHSND ELFNRQTLQS FIVPQSQDGS MKQLKKRRKS DSRCKPLPPS KRLRLEAQRV LKERVQEIAD KKGIKLRFCN
401: LKECENNHNV MNSPCANIRR EIGWPHGVPF VHPHDLPNKA KIGFLETYEP GWSETHDMEF SLSETAQGNQ HVTN
101: QSWQESYEYR PGLTPTEPSN SMEFPPAGLP DIFALLGKAA RVVLDAIGFY LNLRSCPFTE ILDNVPLRNC EVSSSVLSVC CYARPSFHGA QHHSLTEDEQ
201: LILYSDHDHQ LDKSLISFVK SDKAGLHIRD MHGQWILVDV DLGPQEAVVY PGLALYQATA GYVSPAVHRT DLNSLQGSIE GRFSLAFKLM PKSMTNLSCS
301: EMRAAGHGVE AQFQLPVSVD DFMQRSHSND ELFNRQTLQS FIVPQSQDGS MKQLKKRRKS DSRCKPLPPS KRLRLEAQRV LKERVQEIAD KKGIKLRFCN
401: LKECENNHNV MNSPCANIRR EIGWPHGVPF VHPHDLPNKA KIGFLETYEP GWSETHDMEF SLSETAQGNQ HVTN
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.