Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G235000.1 | Wheat | cytosol | 99.17 | 99.17 |
| OQU89978 | Sorghum | cytosol, nucleus, peroxisome | 75.47 | 76.74 |
| Os07t0496900-02 | Rice | nucleus | 73.8 | 69.07 |
| Zm00001d006430_P001 | Maize | cytosol | 73.8 | 68.53 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, peroxisome | 64.24 | 65.33 |
| Zm00001d021542_P001 | Maize | cytosol | 33.06 | 60.0 |
| PGSC0003DMT400057242 | Potato | nucleus | 58.84 | 59.96 |
| VIT_19s0027g00600.t01 | Wine grape | cytosol | 61.54 | 59.2 |
| CDY23555 | Canola | nucleus | 56.96 | 58.92 |
| Bra034715.1-P | Field mustard | nucleus | 56.76 | 58.84 |
| KRH13671 | Soybean | cytosol | 51.98 | 58.82 |
| CDY60118 | Canola | nucleus | 56.55 | 58.62 |
| Solyc07g066450.2.1 | Tomato | nucleus | 58.84 | 57.06 |
| AT3G12940.2 | Thale cress | nucleus | 57.8 | 56.73 |
| KRH43789 | Soybean | nucleus | 59.04 | 56.35 |
| TraesCS7B01G331900.1 | Wheat | cytosol | 20.37 | 31.31 |
| TraesCS5B01G481600.1 | Wheat | nucleus | 5.61 | 7.92 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G252300.1 | EnsemblPlantsGene:TraesCS2B01G252300 | PANTHER:PTHR33644 | PANTHER:PTHR33644:SF2 | SUPFAM:SSF51197 | MapMan:35.2 |
Description
No Description!
Coordinates
chr2B:-:270207959..270224100
Molecular Weight (calculated)
53139.1 Da
IEP (calculated)
5.458
GRAVY (calculated)
-0.337
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MPALRLPLEI KIQEPSPSMD DAGGDILPSL GRVRLGDLAA VEGLASDSYK ICVSTLMQSL AQYSAVIIQL PPADAALLRS GLDSARLFFH QRVYDSVGDV
101: VHSDDAREWK TSGYYADPQM WLEMYDYRPG VTVREHGGAM ELSPSGLPDI FSMLGKVCRD ILDAVSFSLN LRSCVFTEIL DNMPLRSQEV SSSVLSACCH
201: SRPSFEEAQQ HGIASPDDSQ LLMFSEQEQQ IDKTLLTLVK SDRSGLYIKD LHGRWILVDG DLGPHDIVVY PGLALYQETS GYVNPAVHKT EVGNLQGCMF
301: GRCSLAFKLT PRFVARPGGS EMGAAGHGVD TQFQVPVTVT EFMQTDHSAD QLFPKNNESS SQAEQDASPN SATKEKKGIT RTKSLPPSKR LRLEAQRVLK
401: QRVQDIADRR GIKLRFCNLK ECESHIRSLD SPCDNIRTEI GWPQGVPFVH PHDLPNKAKL GFLEAYEPGW TASQQDESQS L
101: VHSDDAREWK TSGYYADPQM WLEMYDYRPG VTVREHGGAM ELSPSGLPDI FSMLGKVCRD ILDAVSFSLN LRSCVFTEIL DNMPLRSQEV SSSVLSACCH
201: SRPSFEEAQQ HGIASPDDSQ LLMFSEQEQQ IDKTLLTLVK SDRSGLYIKD LHGRWILVDG DLGPHDIVVY PGLALYQETS GYVNPAVHKT EVGNLQGCMF
301: GRCSLAFKLT PRFVARPGGS EMGAAGHGVD TQFQVPVTVT EFMQTDHSAD QLFPKNNESS SQAEQDASPN SATKEKKGIT RTKSLPPSKR LRLEAQRVLK
401: QRVQDIADRR GIKLRFCNLK ECESHIRSLD SPCDNIRTEI GWPQGVPFVH PHDLPNKAKL GFLEAYEPGW TASQQDESQS L
001: MMAGNGMPTL GRVKVCDLVP SEGLPSDSYK LAVTTLSQSL AQYSAAIIQF PASDGALLRS GLDSARLYFH QRDSYPATNN MIHTNDSQEW CKTSGYYADP
101: QSWQESYEYR PGLTPTEPSN SMEFPPAGLP DIFALLGKAA RVVLDAIGFY LNLRSCPFTE ILDNVPLRNC EVSSSVLSVC CYARPSFHGA QHHSLTEDEQ
201: LILYSDHDHQ LDKSLISFVK SDKAGLHIRD MHGQWILVDV DLGPQEAVVY PGLALYQATA GYVSPAVHRT DLNSLQGSIE GRFSLAFKLM PKSMTNLSCS
301: EMRAAGHGVE AQFQLPVSVD DFMQRSHSND ELFNRQTLQS FIVPQSQDGS MKQLKKRRKS DSRCKPLPPS KRLRLEAQRV LKERVQEIAD KKGIKLRFCN
401: LKECENNHNV MNSPCANIRR EIGWPHGVPF VHPHDLPNKA KIGFLETYEP GWSETHDMEF SLSETAQGNQ HVTNCNHSSP NNTPFPFAET
101: QSWQESYEYR PGLTPTEPSN SMEFPPAGLP DIFALLGKAA RVVLDAIGFY LNLRSCPFTE ILDNVPLRNC EVSSSVLSVC CYARPSFHGA QHHSLTEDEQ
201: LILYSDHDHQ LDKSLISFVK SDKAGLHIRD MHGQWILVDV DLGPQEAVVY PGLALYQATA GYVSPAVHRT DLNSLQGSIE GRFSLAFKLM PKSMTNLSCS
301: EMRAAGHGVE AQFQLPVSVD DFMQRSHSND ELFNRQTLQS FIVPQSQDGS MKQLKKRRKS DSRCKPLPPS KRLRLEAQRV LKERVQEIAD KKGIKLRFCN
401: LKECENNHNV MNSPCANIRR EIGWPHGVPF VHPHDLPNKA KIGFLETYEP GWSETHDMEF SLSETAQGNQ HVTNCNHSSP NNTPFPFAET
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.