Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 1
- mitochondrion 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50340 | Canola | nucleus | 0.66 | 1.21 |
| Bra038722.1-P | Field mustard | cytosol | 0.66 | 0.92 |
| KRH11911 | Soybean | nucleus | 0.66 | 0.88 |
| TraesCS3B01G268100.1 | Wheat | cytosol, nucleus, plastid | 0.33 | 0.51 |
| TraesCS3B01G312800.1 | Wheat | nucleus | 0.33 | 0.48 |
| TraesCS7B01G202700.1 | Wheat | cytosol | 0.33 | 0.48 |
| TraesCS2B01G625700.1 | Wheat | cytosol | 0.33 | 0.43 |
| TraesCS2B01G010000.1 | Wheat | nucleus | 0.33 | 0.34 |
| GSMUA_Achr1P12990_001 | Banana | plastid | 0.0 | 0.0 |
| KRH36952 | Soybean | cytosol | 0.0 | 0.0 |
| TraesCS1B01G327900.1 | Wheat | mitochondrion | 0.0 | 0.0 |
| TraesCS3B01G135200.1 | Wheat | nucleus, peroxisome, plastid | 0.0 | 0.0 |
| TraesCS3B01G267900.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS6B01G430200.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G279800.1 | EnsemblPlantsGene:TraesCS2B01G279800 | PANTHER:PTHR13620 | PANTHER:PTHR13620:SF33 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr2B:+:386106981..386107889
Molecular Weight (calculated)
32260.0 Da
IEP (calculated)
3.571
GRAVY (calculated)
-0.597
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPRAQPPAP RAPVRPRAPP PAPRAIMVPR APPPAPRAPV TPCLLSPTRR AAVNPHTPEP HLALAPTAVA VDTAESSSKV AALPGFTGSD TDTDADTEAE
101: LGGLSLVRSN YVSDDDDDDD LSSDGYEVVG RGAVTDEDEE EENVYDYVAR TGFLSDGDYV VGPGIQSDDD EEDGYEGYVI GTGTLNAEDV GEQGYAYKEY
201: AGIGILTVEE GHNEYTGILT VGNEAAAYED EVFVSNLHAT IVEVEESGLQ LDVYQEPPEC YDNSIEAFQG GDDGYGQDDG GDWYDQGDDG YVQDDDSYDA
301: FY
101: LGGLSLVRSN YVSDDDDDDD LSSDGYEVVG RGAVTDEDEE EENVYDYVAR TGFLSDGDYV VGPGIQSDDD EEDGYEGYVI GTGTLNAEDV GEQGYAYKEY
201: AGIGILTVEE GHNEYTGILT VGNEAAAYED EVFVSNLHAT IVEVEESGLQ LDVYQEPPEC YDNSIEAFQG GDDGYGQDDG GDWYDQGDDG YVQDDDSYDA
301: FY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.