Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH36952 | Soybean | cytosol | 57.46 | 63.59 |
| CDY50341 | Canola | cytosol | 39.04 | 40.45 |
| CDY50548 | Canola | cytosol | 39.47 | 40.18 |
| Bra038717.1-P | Field mustard | cytosol | 39.47 | 40.18 |
| Bra038723.1-P | Field mustard | cytosol | 38.16 | 39.55 |
| Bra038722.1-P | Field mustard | cytosol | 37.28 | 39.17 |
| AT3G12410.1 | Thale cress | plastid | 39.47 | 39.13 |
| AT2G36110.1 | Thale cress | mitochondrion | 39.91 | 38.08 |
| Bra038721.1-P | Field mustard | plastid | 30.26 | 37.7 |
| AT3G12470.1 | Thale cress | mitochondrion | 35.53 | 36.82 |
| AT3G12460.1 | Thale cress | cytosol, nucleus, plastid | 38.16 | 35.95 |
| CDY71159 | Canola | cytosol | 39.91 | 35.55 |
| AT3G12430.1 | Thale cress | cytosol, nucleus, plastid | 35.53 | 34.03 |
| CDY50340 | Canola | nucleus | 24.56 | 33.94 |
| AT3G12420.1 | Thale cress | cytosol | 26.75 | 32.97 |
| TraesCS1D01G315900.1 | Wheat | mitochondrion | 28.51 | 32.66 |
| TraesCS1A01G315700.1 | Wheat | mitochondrion | 28.51 | 32.66 |
| Os07t0112300-00 | Rice | mitochondrion | 16.23 | 31.9 |
| KRH49260 | Soybean | cytosol, nucleus, peroxisome | 28.95 | 31.13 |
| CDY50545 | Canola | cytosol, nucleus, plastid | 31.14 | 30.6 |
| EES02313 | Sorghum | mitochondrion, plastid | 32.46 | 30.58 |
| CDY50339 | Canola | plastid | 23.68 | 30.17 |
| KRH00116 | Soybean | cytosol | 27.63 | 29.86 |
| KRH00114 | Soybean | cytosol | 28.51 | 28.76 |
| KRH00115 | Soybean | nucleus | 26.32 | 28.17 |
| KRH26003 | Soybean | nucleus | 24.56 | 26.92 |
| GSMUA_Achr1P12990_001 | Banana | plastid | 21.05 | 25.26 |
| KRH49255 | Soybean | nucleus | 26.32 | 25.21 |
| Zm00001d018645_P001 | Maize | mitochondrion | 29.82 | 25.09 |
| OQU88309 | Sorghum | mitochondrion | 26.75 | 25.0 |
| AT3G12440.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 38.6 | 24.93 |
| KRH63674 | Soybean | cytosol | 17.11 | 23.64 |
| KRH00112 | Soybean | nucleus | 18.42 | 21.0 |
| EER95744 | Sorghum | nucleus | 33.77 | 15.81 |
| Os07t0112400-00 | Rice | mitochondrion | 33.77 | 15.52 |
| KRH31568 | Soybean | mitochondrion | 11.84 | 13.3 |
| KRG97350 | Soybean | nucleus | 16.23 | 12.67 |
| TraesCS2A01G262300.1 | Wheat | cytosol, mitochondrion, nucleus | 32.46 | 12.63 |
| TraesCS2D01G261700.1 | Wheat | cytosol, mitochondrion, nucleus | 30.7 | 12.17 |
| TraesCS2B01G279800.1 | Wheat | mitochondrion, plastid | 0.88 | 0.66 |
Protein Annotations
| InterPro:3'-5'_exonuclease_dom | Gene3D:3.30.420.10 | MapMan:35.2 | EMBL:ACUP02009254 | EnsemblPlantsGene:GLYMA_15G138600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008408 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 | UniProt:I1MGC8 | InterPro:IPR036397 |
| EnsemblPlants:KRH11911 | ProteinID:KRH11911 | ProteinID:KRH11911.1 | PFAM:PF01612 | PANTHER:PTHR13620 | PANTHER:PTHR13620:SF8 |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SUPFAM:SSF53098 | UniParc:UPI00029676EE | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr15:+:11284214..11286650
Molecular Weight (calculated)
26094.9 Da
IEP (calculated)
6.422
GRAVY (calculated)
-0.439
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTVTTHKIS FQHELHEIHT VGTELSVTVT AKASVVREWL SSRLYFRQQY VRRKRLVVGL GVQWTGGSDS PADTLQLCVG RRCLIFQLAH AKSVPKKLRT
101: FLLDASHTFV GFWNHLDRRK LESSEHGLEM VRDPLDLRRY AKTEDGDDLT QASVEEIVEQ CLGFDVEQRS EISMSDWNDE YLSDDQIAYA TIDARCAFLI
201: GRKSRAWERT VRDDKIDLDL ADIHKGGG
101: FLLDASHTFV GFWNHLDRRK LESSEHGLEM VRDPLDLRRY AKTEDGDDLT QASVEEIVEQ CLGFDVEQRS EISMSDWNDE YLSDDQIAYA TIDARCAFLI
201: GRKSRAWERT VRDDKIDLDL ADIHKGGG
001: MARIRRRIQK RHIHENRYID FFGERLIVTV THTTSTIRRW IHSIRFFSRL RSSHPLVVGL DVQWTPGGSD PPPDILQLCV GNRCLIIQLS HCKRIPEVLR
101: SFLEDETITF VGVWNSQDQG KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS HDQIVQASDD VYVCCKLGVK
201: ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF
101: SFLEDETITF VGVWNSQDQG KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS HDQIVQASDD VYVCCKLGVK
201: ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIH3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.