Factsheet for Os07t0112300-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G315900.1	Wheat	mitochondrion	50.86	29.65
TraesCS1A01G315700.1	Wheat	mitochondrion	50.0	29.15
TraesCS1B01G327900.1	Wheat	mitochondrion	49.14	28.64
EES02313	Sorghum	mitochondrion, plastid	56.9	27.27
OQU88309	Sorghum	mitochondrion	54.31	25.82
Zm00001d018645_P001	Maize	mitochondrion	50.0	21.4
Os01t0660800-01	Rice	nucleus	35.34	20.6
Os01t0737600-00	Rice	cytosol	34.48	19.23
Os04t0225100-01	Rice	cytosol	34.48	18.96
Os01t0300000-01	Rice	nucleus	32.76	18.91
KRH36952	Soybean	cytosol	31.9	17.96
Bra038717.1-P	Field mustard	cytosol	33.62	17.41
Os11t0222320-00	Rice	cytosol, nucleus	19.83	17.04
CDY50548	Canola	cytosol	32.76	16.96
GSMUA_Achr1P12990_001	Banana	plastid	27.59	16.84
Bra038722.1-P	Field mustard	cytosol	31.03	16.59
CDY50340	Canola	nucleus	23.28	16.36
KRH11911	Soybean	nucleus	31.9	16.23
Os01t0737700-00	Rice	nucleus	31.9	15.81
AT3G12460.1	Thale cress	cytosol, nucleus, plastid	32.76	15.7
CDY50339	Canola	plastid	24.14	15.64
AT3G12430.1	Thale cress	cytosol, nucleus, plastid	31.9	15.55
Bra038721.1-P	Field mustard	plastid	24.14	15.3
CDY71159	Canola	cytosol	33.62	15.23
AT3G12470.1	Thale cress	mitochondrion	28.45	15.0
AT2G36110.1	Thale cress	mitochondrion	30.17	14.64
AT3G12410.1	Thale cress	plastid	28.45	14.35
CDY50341	Canola	cytosol	26.72	14.09
Bra038723.1-P	Field mustard	cytosol	25.0	13.18
Os01t0299700-01	Rice	cytosol, peroxisome	26.72	13.08
CDY50545	Canola	cytosol, nucleus, plastid	25.0	12.5
Os07t0112400-00	Rice	mitochondrion	50.86	11.9
AT3G12440.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	30.17	9.92
Os01t0660500-00	Rice	mitochondrion	32.76	9.72
AT3G12420.1	Thale cress	cytosol	13.79	8.65
Os04t0129200-00	Rice	nucleus	21.55	8.39

Protein Annotations

InterPro:3'-5'_exonuclease_dom	Gene3D:3.30.420.10	MapMan:35.2	UniProt:A0A0P0X1X7	ProteinID:BAS99774.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008408	GO:GO:0009987	GO:GO:0016787	GO:GO:0090305	InterPro:IPR036397	EnsemblPlantsGene:Os07g0112300
EnsemblPlants:Os07t0112300-00	PFAM:PF01612	PANTHER:PTHR13620	PANTHER:PTHR13620:SF33	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SUPFAM:SSF53098	UniParc:UPI000393BFB6	:	:	:	:

Description

3'-5' exonuclease domain containing protein. (Os07t0112300-00)

Coordinates

chr7:-:689982..690619

Molecular Weight (calculated)

12871.7 Da

IEP (calculated)

10.768

GRAVY (calculated)

-0.146

Length

116 amino acids

Sequence
(BLAST)

001: LARAGAVPAV LRRFMADARA AFVAHNVRHD CRKLEEHHGL EVARGVELRR LVAGMGNASM KRMAEEHLGL VGVWKPRRVG TSRWHARRLT KGQVEYACVD
101: ACLSFHLGVH LDAGDI

Best Arabidopsis Sequence Match ( AT3G12460.1 )
(BLAST)

001: MAPTIRTIGS YATQQRYSVD FFGEELFVTV TPDPSVIGQW IHDVFFHNRL SSHPLVVGVG VQWTPSGYHP ASPPVSYRSD SSPDSYRSDS PPVFYSSDPP
101: ADTLQLCVGN RCIIIQLRYC ERVPQVLRNF LADRDNTFVG IWNSQDAGKL ERSRHQLEIA ELMDLREFVS DSSGRRSMYN YSLEKIVEEN LGYPGVRLDR
201: EVSMSDWRVY NLSYDQILQA SIDVYACCSL AILDHLWEEK NR

Arabidopsis Description

Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHG2]
SUBAcon: [cytosol,nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.