Factsheet for Os01t0299700-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0300000-01	Rice	nucleus	52.32	61.69
TraesCS3D01G118000.1	Wheat	nucleus, peroxisome, plastid	50.63	60.0
TraesCS3B01G135200.1	Wheat	nucleus, peroxisome, plastid	50.63	60.0
TraesCS3A01G116100.1	Wheat	mitochondrion, nucleus, plastid	49.37	58.21
Zm00001d009130_P001	Maize	nucleus	49.37	54.67
KXG32361	Sorghum	mitochondrion	49.37	53.42
HORVU7Hr1G098080.1	Barley	nucleus	40.51	48.73
HORVU3Hr1G021110.1	Barley	nucleus	40.51	48.73
Os01t0660800-01	Rice	nucleus	32.49	38.69
VIT_14s0060g01000.t01	Wine grape	nucleus	23.63	35.9
VIT_14s0060g00990.t01	Wine grape	nucleus	31.65	35.71
PGSC0003DMT400087534	Potato	cytosol, nucleus, plastid	23.63	35.44
Solyc01g100680.1.1	Tomato	plastid	29.54	34.65
PGSC0003DMT400016348	Potato	nucleus	30.38	34.45
PGSC0003DMT400092627	Potato	nucleus	29.54	33.98
Solyc04g076930.1.1	Tomato	cytosol, nucleus, plastid	18.57	33.85
Solyc01g100670.1.1	Tomato	cytosol	23.21	33.54
Os01t0737600-00	Rice	cytosol	29.11	33.17
Os04t0225100-01	Rice	cytosol	28.69	32.23
Os11t0222320-00	Rice	cytosol, nucleus	17.72	31.11
KRH26003	Soybean	nucleus	25.32	28.85
Os01t0737700-00	Rice	nucleus	28.27	28.63
Os07t0112300-00	Rice	mitochondrion	13.08	26.72
KRH63674	Soybean	cytosol	18.14	26.06
Os04t0129200-00	Rice	nucleus	20.68	16.44
Os01t0660500-00	Rice	mitochondrion	27.0	16.37
Os07t0112400-00	Rice	mitochondrion	23.21	11.09

Protein Annotations

InterPro:3'-5'_exonuclease_dom	Gene3D:3.30.420.10	MapMan:35.2	ProteinID:BAF04729.1	ProteinID:BAS71706.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008408	GO:GO:0009987	GO:GO:0016787	GO:GO:0090305	InterPro:IPR036397	EnsemblPlantsGene:Os01g0299700
EnsemblPlants:Os01t0299700-01	PFAM:PF01612	PANTHER:PTHR13620	PANTHER:PTHR13620:SF34	UniProt:Q0JNE9	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	SUPFAM:SSF53098	UniParc:UPI0000DD8AAB	SEG:seg	:	:

Description

3'-5' exonuclease domain containing protein. (Os01t0299700-01)

Coordinates

chr1:-:10986093..10986991

Molecular Weight (calculated)

25494.6 Da

IEP (calculated)

7.681

GRAVY (calculated)

-0.047

Length

237 amino acids

Sequence
(BLAST)

001: QHHTPHFFDR SIDRSAPLLL QDVDGGCTVS FGSAAIDTTV TSDAAAADEW VRRVRASAAT TPRGGGGLLV GLDCEWKPCD HLWPAVAPTV AILQLCAGDS
101: CLILQLLHVA GARRVPPLVG DLLADPSVRL VGIGIGENAA KLADGYGVRC AAPVDLEDVC DRRLGRLPGA RRLGLKGYVR EVLGLTMEKP MDVTRSDWER
201: RHLDAAQVRY ACSARGSSPT SRQRDRHACL QCTWVVI

Best Arabidopsis Sequence Match ( AT4G13870.1 )
(BLAST)

001: MSSSNWIDDA FTEEELLAID AIEASYNFSR SSSSSSSAAP TVQATTSVHG HEEDPNQIPN NIRRQLPRSI TSSTSYKRFP LSRCRARNFP AMRFGGRILY
101: SKTATEVDKR AMQLIKVLDT KRDESGIAFV GLDIEWRPSF RKGVLPGKVA TVQICVDSNY CDVMHIFHSG IPQSLQHLIE DSTLVKVGIG IDGDSVKLFH
201: DYGVSIKDVE DLSDLANQKI GGDKKWGLAS LTETLVCKEL LKPNRIRLGN WEFYPLSKQQ LQYAATDAYA SWHLYKDLPD AVSGS

Arabidopsis Description

WEXWerner Syndrome-like exonuclease [Source:UniProtKB/Swiss-Prot;Acc:Q84LH3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.