Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0660800-01 | Rice | nucleus | 42.22 | 28.64 |
| Os04t0225100-01 | Rice | cytosol | 42.22 | 27.01 |
| OQU87276 | Sorghum | nucleus | 43.7 | 26.11 |
| Solyc11g006480.1.1 | Tomato | nucleus | 33.33 | 25.42 |
| EES03381 | Sorghum | nucleus | 41.48 | 24.78 |
| TraesCS3D01G239600.1 | Wheat | cytosol | 42.96 | 24.58 |
| TraesCS6A01G390200.1 | Wheat | nucleus | 35.56 | 24.24 |
| KRH00116 | Soybean | cytosol | 37.78 | 24.17 |
| VIT_08s0040g00710.t01 | Wine grape | cytosol | 37.04 | 24.04 |
| Os01t0737600-00 | Rice | cytosol | 36.3 | 23.56 |
| TraesCS3B01G267900.1 | Wheat | cytosol | 42.22 | 23.17 |
| PGSC0003DMT400093830 | Potato | cytosol | 34.81 | 22.93 |
| Os01t0300000-01 | Rice | nucleus | 34.07 | 22.89 |
| Os01t0660500-00 | Rice | mitochondrion | 65.93 | 22.76 |
| Solyc08g078620.1.1 | Tomato | mitochondrion | 34.81 | 22.71 |
| KRH00115 | Soybean | nucleus | 35.56 | 22.54 |
| PGSC0003DMT400036459 | Potato | extracellular | 34.81 | 21.76 |
| KRH49255 | Soybean | nucleus | 37.78 | 21.43 |
| PGSC0003DMT400094103 | Potato | mitochondrion | 33.33 | 21.13 |
| Solyc12g094540.1.1 | Tomato | cytosol | 31.85 | 21.08 |
| GSMUA_Achr1P12990_001 | Banana | plastid | 29.63 | 21.05 |
| PGSC0003DMT400032474 | Potato | cytosol, nucleus, vacuole | 36.3 | 21.03 |
| Solyc10g078200.1.1 | Tomato | nucleus | 31.85 | 20.98 |
| Solyc08g007350.1.1 | Tomato | cytosol | 36.3 | 20.85 |
| Os01t0737700-00 | Rice | nucleus | 35.56 | 20.51 |
| PGSC0003DMT400075613 | Potato | nucleus | 33.33 | 20.45 |
| KRH49260 | Soybean | cytosol, nucleus, peroxisome | 31.85 | 20.28 |
| Solyc12g042390.1.1 | Tomato | cytosol | 32.59 | 20.28 |
| Solyc01g103460.2.1 | Tomato | cytosol | 31.85 | 20.19 |
| Os07t0112300-00 | Rice | mitochondrion | 17.04 | 19.83 |
| PGSC0003DMT400064032 | Potato | nucleus | 30.37 | 19.07 |
| PGSC0003DMT400032554 | Potato | cytosol | 35.56 | 19.05 |
| KRH00114 | Soybean | cytosol | 31.11 | 18.58 |
| Os01t0299700-01 | Rice | cytosol, peroxisome | 31.11 | 17.72 |
| KRH00112 | Soybean | nucleus | 21.48 | 14.5 |
| Zm00001d011513_P001 | Maize | plastid | 41.48 | 12.84 |
| Os04t0129200-00 | Rice | nucleus | 25.19 | 11.41 |
| Os07t0112400-00 | Rice | mitochondrion | 31.11 | 8.47 |
Protein Annotations
| EnsemblPlants:Os11t0222320-00 | EnsemblPlantsGene:Os11g0222320 | Gene3D:3.30.420.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR036397 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | PANTHER:PTHR13620 | PANTHER:PTHR13620:SF13 | ProteinID:BAT13259.1 |
| SEG:seg | SUPFAM:SSF53098 | UniParc:UPI0003938763 | UniProt:A0A0P0Y042 | MapMan:35.2 | : |
Description
Ribonuclease H-like domain containing protein. (Os11t0222320-00)
Coordinates
chr11:-:6398466..6398952
Molecular Weight (calculated)
14716.4 Da
IEP (calculated)
5.015
GRAVY (calculated)
-0.321
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: ATRGGVLIVS IDTEWREDHE PDDKKCYKVV VLQLCVNRRC LVFQLYQASN EVPRELAEFL ADAGVRFVGV GVDGGVRRLA NECNLRVACA VDLRDAAAAV
101: LGRPELARVG AEEPGAHSDG HPHGEGERHN DEQMG
101: LGRPELARVG AEEPGAHSDG HPHGEGERHN DEQMG
001: MSTSTVETGY GGRIRVTVAR NDRDITSEVR TFLCNKENAN KIIGLDTERS VVGGDSEYPP ESKLVILELS DGQNCLIIPL PYVQGNKLPV SLTNFLNLPD
101: FTFTGVGINK ALKMLKSECG LTCKNAVDIG PSSPIYEDWD NDSLTEDQIN LAAANAYLAF KVGNLIREAM Y
101: FTFTGVGINK ALKMLKSECG LTCKNAVDIG PSSPIYEDWD NDSLTEDQIN LAAANAYLAF KVGNLIREAM Y
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LZQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.