Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 6
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g007350.1.1 | Tomato | cytosol | 55.07 | 48.51 |
| TraesCS3A01G239600.1 | Wheat | cytosol | 43.0 | 45.18 |
| TraesCS3D01G239900.1 | Wheat | cytosol, nucleus, plastid | 43.0 | 45.18 |
| TraesCS3B01G268100.1 | Wheat | cytosol, nucleus, plastid | 43.0 | 45.18 |
| TraesCS7A01G302600.1 | Wheat | cytosol | 45.41 | 44.98 |
| TraesCS4A01G026000.1 | Wheat | cytosol | 41.06 | 44.5 |
| TraesCS5A01G007100.1 | Wheat | cytosol | 43.0 | 44.28 |
| TraesCS3D01G239800.1 | Wheat | nucleus | 42.51 | 44.0 |
| Zm00001d043985_P001 | Maize | cytosol, nucleus, plastid | 42.51 | 44.0 |
| HORVU7Hr1G071770.1 | Barley | cytosol | 44.93 | 43.87 |
| Zm00001d011507_P001 | Maize | cytosol | 42.51 | 43.56 |
| TraesCS3A01G239500.1 | Wheat | nucleus | 42.03 | 43.5 |
| TraesCS7B01G202700.1 | Wheat | cytosol | 43.48 | 43.27 |
| Os01t0660800-01 | Rice | nucleus | 41.55 | 43.22 |
| EES03384 | Sorghum | nucleus | 42.03 | 43.07 |
| Solyc10g078200.1.1 | Tomato | nucleus | 42.51 | 42.93 |
| EES01443 | Sorghum | cytosol | 42.03 | 42.86 |
| Os01t0737600-00 | Rice | cytosol | 43.0 | 42.79 |
| TraesCS3A01G278600.1 | Wheat | cytosol | 39.61 | 42.71 |
| Zm00001d043554_P001 | Maize | cytosol | 41.55 | 42.16 |
| EES01441 | Sorghum | cytosol, nucleus, plastid | 42.03 | 41.43 |
| EES01442 | Sorghum | nucleus | 41.55 | 41.35 |
| TraesCS3D01G278900.1 | Wheat | nucleus | 41.06 | 40.87 |
| TraesCS3B01G312800.1 | Wheat | nucleus | 41.06 | 40.87 |
| Solyc01g100670.1.1 | Tomato | cytosol | 32.37 | 40.85 |
| EES03385 | Sorghum | cytosol, nucleus, plastid | 39.61 | 40.8 |
| TraesCS7D01G297900.1 | Wheat | cytosol | 36.72 | 40.64 |
| Os04t0225100-01 | Rice | cytosol | 41.06 | 40.28 |
| TraesCS6B01G430200.1 | Wheat | cytosol | 37.68 | 39.0 |
| Solyc11g006480.1.1 | Tomato | nucleus | 33.33 | 38.98 |
| HORVU3Hr1G069990.1 | Barley | nucleus | 43.0 | 38.86 |
| Solyc12g094540.1.1 | Tomato | cytosol | 38.16 | 38.73 |
| HORVU0Hr1G006750.1 | Barley | nucleus | 37.2 | 38.12 |
| KXG33324 | Sorghum | cytosol | 36.23 | 38.07 |
| Solyc01g103460.2.1 | Tomato | cytosol | 39.13 | 38.03 |
| TraesCS2A01G565200.1 | Wheat | cytosol | 42.51 | 37.93 |
| TraesCS6A01G390200.1 | Wheat | nucleus | 36.23 | 37.88 |
| Solyc12g042390.1.1 | Tomato | cytosol | 39.61 | 37.79 |
| Solyc04g076930.1.1 | Tomato | cytosol, nucleus, plastid | 23.67 | 37.69 |
| Solyc01g100680.1.1 | Tomato | plastid | 36.72 | 37.62 |
| TraesCS2B01G625700.1 | Wheat | cytosol | 42.03 | 37.34 |
| Os01t0737700-00 | Rice | nucleus | 42.03 | 37.18 |
| OQU87276 | Sorghum | nucleus | 39.61 | 36.28 |
| Os11t0222320-00 | Rice | cytosol, nucleus | 22.71 | 34.81 |
| EES03381 | Sorghum | nucleus | 37.68 | 34.51 |
| TraesCS3D01G239600.1 | Wheat | cytosol | 37.68 | 33.05 |
| GSMUA_Achr1P12990_001 | Banana | plastid | 29.95 | 32.63 |
| TraesCS3B01G267900.1 | Wheat | cytosol | 38.16 | 32.11 |
| Zm00001d047288_P001 | Maize | nucleus | 21.74 | 22.28 |
| Zm00001d036734_P001 | Maize | nucleus | 27.54 | 21.19 |
| Os01t0660500-00 | Rice | mitochondrion | 35.27 | 18.67 |
| Zm00001d011513_P001 | Maize | plastid | 37.68 | 17.89 |
| Solyc09g092340.2.1 | Tomato | nucleus | 23.19 | 16.0 |
| Zm00001d022094_P001 | Maize | nucleus | 30.43 | 14.93 |
| Zm00001d010107_P001 | Maize | nucleus | 29.47 | 5.93 |
Protein Annotations
| InterPro:3'-5'_exonuclease_dom | Gene3D:3.30.420.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008408 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR036397 | UniProt:K4CNM1 | PFAM:PF01612 | PANTHER:PTHR13620 |
| PANTHER:PTHR13620:SF34 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SUPFAM:SSF53098 | EnsemblPlantsGene:Solyc08g078620.1 | EnsemblPlants:Solyc08g078620.1.1 |
| UniParc:UPI000276ACDD | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:62387534..62388157
Molecular Weight (calculated)
24151.5 Da
IEP (calculated)
6.713
GRAVY (calculated)
-0.095
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRICRAHTL FYSIPFYRNQ IEVTVTKKGS EVDRWIQQTV HIHRRRLHEL LVGLDIEWRA IRDPAEENPR VALLQLCVGH RCLIFQLIHA DYIPDSLISF
101: LGDTNFSFLG VNVNGDCEKL HEDYALLVAN PLDLNKMAMD VYKIKEYGRI GLKRMAHEIL GKVMQKPLGV TMSDWDAEEL EYEQVEYACI DAFMSFKLGL
201: KLFYKMQ
101: LGDTNFSFLG VNVNGDCEKL HEDYALLVAN PLDLNKMAMD VYKIKEYGRI GLKRMAHEIL GKVMQKPLGV TMSDWDAEEL EYEQVEYACI DAFMSFKLGL
201: KLFYKMQ
001: MASPTIRTVA SYNTHLEYSV DFFGDEFIVT VTWDSSVISR WIRNVLFNNR FSSHPLVVGV GVQWTPFSYY SDPRPNNYYA DPPPIRYYSD NPADILQLCV
101: GNRCLIIQLG YCDQVPNNLR SFLADPETTF VGVWNGQDAG KLARCCHQLE IGELLDIRRY VTDSWGRSMR RSSFEEIVEE CMGYQGVMLD PEISMSDWTA
201: YDLDLDQILQ ASLDAYVCHQ LGVWTRLWEV
101: GNRCLIIQLG YCDQVPNNLR SFLADPETTF VGVWNGQDAG KLARCCHQLE IGELLDIRRY VTDSWGRSMR RSSFEEIVEE CMGYQGVMLD PEISMSDWTA
201: YDLDLDQILQ ASLDAYVCHQ LGVWTRLWEV
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHG7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.