Factsheet for Os01t0660500-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0222320-00	Rice	cytosol, nucleus	22.76	65.93
Os01t0660800-01	Rice	nucleus	24.04	47.24
OQU87276	Sorghum	nucleus	26.09	45.13
EES03381	Sorghum	nucleus	25.83	44.69
TraesCS6A01G390200.1	Wheat	nucleus	22.51	44.44
TraesCS3D01G239600.1	Wheat	cytosol	26.34	43.64
Os04t0225100-01	Rice	cytosol	23.27	43.13
VIT_08s0040g00710.t01	Wine grape	cytosol	22.76	42.79
Solyc10g078200.1.1	Tomato	nucleus	22.25	42.44
Os01t0737600-00	Rice	cytosol	22.51	42.31
TraesCS3B01G267900.1	Wheat	cytosol	26.6	42.28
KRH00116	Soybean	cytosol	22.76	42.18
PGSC0003DMT400093830	Potato	cytosol	21.99	41.95
Os01t0300000-01	Rice	nucleus	21.48	41.79
KRH49255	Soybean	nucleus	25.06	41.18
KRH00114	Soybean	cytosol	23.27	40.27
KRH00115	Soybean	nucleus	21.74	39.91
KRH49260	Soybean	cytosol, nucleus, peroxisome	21.48	39.62
PGSC0003DMT400094103	Potato	mitochondrion	20.72	38.03
PGSC0003DMT400032474	Potato	cytosol, nucleus, vacuole	22.25	37.34
Solyc12g042390.1.1	Tomato	cytosol	20.46	36.87
PGSC0003DMT400036459	Potato	extracellular	20.2	36.57
PGSC0003DMT400075613	Potato	nucleus	20.46	36.36
Solyc08g007350.1.1	Tomato	cytosol	21.74	36.17
Solyc11g006480.1.1	Tomato	nucleus	16.37	36.16
Solyc01g103460.2.1	Tomato	cytosol	19.69	36.15
Os01t0737700-00	Rice	nucleus	21.48	35.9
PGSC0003DMT400064032	Potato	nucleus	19.69	35.81
KRH00112	Soybean	nucleus	18.16	35.5
Solyc08g078620.1.1	Tomato	mitochondrion	18.67	35.27
Solyc12g094540.1.1	Tomato	cytosol	17.65	33.82
PGSC0003DMT400032554	Potato	cytosol	21.23	32.94
Os07t0112300-00	Rice	mitochondrion	9.72	32.76
GSMUA_Achr1P12990_001	Banana	plastid	15.86	32.63
Os01t0299700-01	Rice	cytosol, peroxisome	16.37	27.0
Zm00001d011513_P001	Maize	plastid	28.13	25.23
Os04t0129200-00	Rice	nucleus	15.86	20.81
Os07t0112400-00	Rice	mitochondrion	15.86	12.5

Protein Annotations

InterPro:3'-5'_exonuclease_dom	Gene3D:3.30.420.10	MapMan:35.2	UniProt:A0A0P0V657	ProteinID:BAS73531.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008408	GO:GO:0009987	GO:GO:0016787	GO:GO:0090305	InterPro:IPR036397	EnsemblPlantsGene:Os01g0660500
EnsemblPlants:Os01t0660500-00	PFAM:PF01612	PANTHER:PTHR13620	PANTHER:PTHR13620:SF13	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SUPFAM:SSF53098	UniParc:UPI000009FA7E	SEG:seg	:	:	:

Description

OsSTA26Similar to 3-5 exonuclease family protein. (Os01t0660500-00)

Coordinates

chr1:-:26912597..26913772

Molecular Weight (calculated)

41512.7 Da

IEP (calculated)

8.733

GRAVY (calculated)

-0.226

Length

391 amino acids

Sequence
(BLAST)

001: MQKTRRRRSM ASKFVVGSSH GPQIRSPHSL DRAKMGGGSG VGDEEAEAEA AAAAEVTGRG GARGDVGGGG GGAGEAAAAV RTGGERRRRC GRVGGVEIPG
101: GVGSQLAANS EVNDSVVPAN SEVRLRFQVA CLSGSVSTGM PALKGHSRGL LFSPQIPNLS SPKLSPTPMA GRYYTPQTHP PPPPENTLDV FMDGDTIPIH
201: TTITSSHSLA AQFINEIARE RPQGGLIVGI DTEWRTDHLP NGKTCYKVAV LQLCVGRRCL LFQIYQAGNM VPHELAEFLA DPSVRFVGVA VNNDMQRLAN
301: DCNLRVACAV DLRYAAAAVL GQPELARAGL KRLALTVMGA HMEKEKNITK SRWGEPTLTW EQVNYACIDA YVSYEIGRRL LSGEPILAAP L

Best Arabidopsis Sequence Match ( AT3G12410.1 )
(BLAST)

001: MASPTIRTVA SYNTHLEYSV DFFGDEFIVT VTWDSSVISR WIRNVLFNNR FSSHPLVVGV GVQWTPFSYY SDPRPNNYYA DPPPIRYYSD NPADILQLCV
101: GNRCLIIQLG YCDQVPNNLR SFLADPETTF VGVWNGQDAG KLARCCHQLE IGELLDIRRY VTDSWGRSMR RSSFEEIVEE CMGYQGVMLD PEISMSDWTA
201: YDLDLDQILQ ASLDAYVCHQ LGVWTRLWEV

Arabidopsis Description

Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.