Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49260 | Soybean | cytosol, nucleus, peroxisome | 58.77 | 58.49 |
| KRH00115 | Soybean | nucleus | 54.98 | 54.46 |
| KRH00114 | Soybean | cytosol | 54.98 | 51.33 |
| KRH49255 | Soybean | nucleus | 55.92 | 49.58 |
| VIT_08s0040g00710.t01 | Wine grape | cytosol | 45.5 | 46.15 |
| PGSC0003DMT400064032 | Potato | nucleus | 45.97 | 45.12 |
| Os01t0660800-01 | Rice | nucleus | 41.71 | 44.22 |
| Solyc01g103460.2.1 | Tomato | cytosol | 44.55 | 44.13 |
| Zm00001d043554_P001 | Maize | cytosol | 42.65 | 44.12 |
| TraesCS3A01G239600.1 | Wheat | cytosol | 40.28 | 43.15 |
| TraesCS3B01G268100.1 | Wheat | cytosol, nucleus, plastid | 40.28 | 43.15 |
| TraesCS3D01G239900.1 | Wheat | cytosol, nucleus, plastid | 39.81 | 42.64 |
| Zm00001d011507_P001 | Maize | cytosol | 40.76 | 42.57 |
| Zm00001d043985_P001 | Maize | cytosol, nucleus, plastid | 40.28 | 42.5 |
| TraesCS5A01G007100.1 | Wheat | cytosol | 40.28 | 42.29 |
| PGSC0003DMT400094103 | Potato | mitochondrion | 42.65 | 42.25 |
| Os01t0737600-00 | Rice | cytosol | 41.23 | 41.83 |
| Os04t0225100-01 | Rice | cytosol | 41.71 | 41.71 |
| TraesCS7A01G302600.1 | Wheat | cytosol | 41.23 | 41.63 |
| EES03384 | Sorghum | nucleus | 39.81 | 41.58 |
| HORVU7Hr1G071770.1 | Barley | cytosol | 41.71 | 41.51 |
| EES01443 | Sorghum | cytosol | 39.81 | 41.38 |
| TraesCS7B01G202700.1 | Wheat | cytosol | 40.76 | 41.35 |
| TraesCS3A01G239500.1 | Wheat | nucleus | 38.86 | 41.0 |
| TraesCS3D01G239800.1 | Wheat | nucleus | 38.86 | 41.0 |
| EES01441 | Sorghum | cytosol, nucleus, plastid | 40.76 | 40.95 |
| TraesCS4A01G026000.1 | Wheat | cytosol | 36.97 | 40.84 |
| TraesCS3B01G312800.1 | Wheat | nucleus | 39.34 | 39.9 |
| TraesCS3D01G278900.1 | Wheat | nucleus | 39.34 | 39.9 |
| TraesCS3A01G278600.1 | Wheat | cytosol | 36.02 | 39.58 |
| TraesCS7D01G297900.1 | Wheat | cytosol | 35.07 | 39.57 |
| EES01442 | Sorghum | nucleus | 38.86 | 39.42 |
| OQU87276 | Sorghum | nucleus | 41.71 | 38.94 |
| TraesCS6A01G390200.1 | Wheat | nucleus | 36.49 | 38.89 |
| EES03385 | Sorghum | cytosol, nucleus, plastid | 36.97 | 38.81 |
| TraesCS6B01G430200.1 | Wheat | cytosol | 36.49 | 38.5 |
| Solyc11g006480.1.1 | Tomato | nucleus | 32.23 | 38.42 |
| Os11t0222320-00 | Rice | cytosol, nucleus | 24.17 | 37.78 |
| EES03381 | Sorghum | nucleus | 40.28 | 37.61 |
| KXG33324 | Sorghum | cytosol | 35.07 | 37.56 |
| HORVU3Hr1G069990.1 | Barley | nucleus | 39.34 | 36.24 |
| KRH00112 | Soybean | nucleus | 34.12 | 36.0 |
| HORVU0Hr1G006750.1 | Barley | nucleus | 34.12 | 35.64 |
| Os01t0737700-00 | Rice | nucleus | 39.34 | 35.47 |
| TraesCS2A01G565200.1 | Wheat | cytosol | 38.86 | 35.34 |
| TraesCS2B01G625700.1 | Wheat | cytosol | 38.86 | 35.19 |
| KRH36952 | Soybean | cytosol | 33.18 | 33.98 |
| TraesCS3D01G239600.1 | Wheat | cytosol | 36.02 | 32.2 |
| TraesCS3B01G267900.1 | Wheat | cytosol | 36.49 | 31.3 |
| GSMUA_Achr1P12990_001 | Banana | plastid | 27.96 | 31.05 |
| KRH26003 | Soybean | nucleus | 29.38 | 29.81 |
| KRH11911 | Soybean | nucleus | 29.86 | 27.63 |
| KRH63674 | Soybean | cytosol | 21.33 | 27.27 |
| Zm00001d047288_P001 | Maize | nucleus | 21.8 | 22.77 |
| Os01t0660500-00 | Rice | mitochondrion | 42.18 | 22.76 |
| KRH31568 | Soybean | mitochondrion | 20.85 | 21.67 |
| Zm00001d036734_P001 | Maize | nucleus | 24.64 | 19.33 |
| Zm00001d011513_P001 | Maize | plastid | 39.81 | 19.27 |
| KRG97350 | Soybean | nucleus | 24.64 | 17.81 |
| Zm00001d022094_P001 | Maize | nucleus | 28.44 | 14.22 |
| Zm00001d010107_P001 | Maize | nucleus | 29.38 | 6.03 |
Protein Annotations
| EntrezGene:100812483 | InterPro:3'-5'_exonuclease_dom | Gene3D:3.30.420.10 | MapMan:35.2 | EMBL:ACUP02011383 | EnsemblPlantsGene:GLYMA_18G194500 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008408 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR036397 |
| UniProt:K7MTD3 | EnsemblPlants:KRH00116 | ProteinID:KRH00116 | ProteinID:KRH00116.1 | PFAM:PF01612 | PANTHER:PTHR13620 |
| PANTHER:PTHR13620:SF34 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SUPFAM:SSF53098 | UniParc:UPI000233E54A | : |
Description
hypothetical protein
Coordinates
chr18:-:46755171..46755806
Molecular Weight (calculated)
23436.8 Da
IEP (calculated)
5.193
GRAVY (calculated)
-0.032
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTITLIGEN STETHNYKLY EVTVEDTDTI QTLLTSSPSQ VSSWLSTNTT RYHPGLIVGL IAQWRPNTLP NMNNPVATLH LCVDHRCLIF QILHAPSVPR
101: ALISFLASPN VTFVGVGIHG HVDKLFQDYN LRVANVRDLR SLAAEELNVP ELYWAGLDTL GLCTLGFEVS TPRYITTSRW DNRSLTEEQV EYAAVDAFVS
201: CGVGRTLTSD N
101: ALISFLASPN VTFVGVGIHG HVDKLFQDYN LRVANVRDLR SLAAEELNVP ELYWAGLDTL GLCTLGFEVS TPRYITTSRW DNRSLTEEQV EYAAVDAFVS
201: CGVGRTLTSD N
001: MAPTIRTIGS YATQQRYSVD FFGEELFVTV TPDPSVIGQW IHDVFFHNRL SSHPLVVGVG VQWTPSGYHP ASPPVSYRSD SSPDSYRSDS PPVFYSSDPP
101: ADTLQLCVGN RCIIIQLRYC ERVPQVLRNF LADRDNTFVG IWNSQDAGKL ERSRHQLEIA ELMDLREFVS DSSGRRSMYN YSLEKIVEEN LGYPGVRLDR
201: EVSMSDWRVY NLSYDQILQA SIDVYACCSL AILDHLWEEK NR
101: ADTLQLCVGN RCIIIQLRYC ERVPQVLRNF LADRDNTFVG IWNSQDAGKL ERSRHQLEIA ELMDLREFVS DSSGRRSMYN YSLEKIVEEN LGYPGVRLDR
201: EVSMSDWRVY NLSYDQILQA SIDVYACCSL AILDHLWEEK NR
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHG2]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.