Factsheet for Os01t0737600-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G278900.1	Wheat	nucleus	72.6	72.6
TraesCS3B01G312800.1	Wheat	nucleus	72.6	72.6
TraesCS3A01G278600.1	Wheat	cytosol	64.9	70.31
Os01t0737700-00	Rice	nucleus	78.85	70.09
EES01442	Sorghum	nucleus	67.79	67.79
Os04t0225100-01	Rice	cytosol	64.9	63.98
HORVU3Hr1G069990.1	Barley	nucleus	69.23	62.88
KXG33324	Sorghum	cytosol	59.13	62.44
Os01t0660800-01	Rice	nucleus	49.52	51.76
PGSC0003DMT400093830	Potato	cytosol	48.56	49.27
VIT_08s0040g00710.t01	Wine grape	cytosol	49.04	49.04
Solyc10g078200.1.1	Tomato	nucleus	46.15	46.83
Solyc08g078620.1.1	Tomato	mitochondrion	42.79	43.0
KRH00115	Soybean	nucleus	43.75	42.72
KRH00114	Soybean	cytosol	45.19	41.59
PGSC0003DMT400075613	Potato	nucleus	43.75	41.36
KRH00116	Soybean	cytosol	41.83	41.23
KRH49260	Soybean	cytosol, nucleus, peroxisome	41.83	41.04
PGSC0003DMT400094103	Potato	mitochondrion	41.83	40.85
Solyc12g094540.1.1	Tomato	cytosol	39.9	40.69
Solyc12g042390.1.1	Tomato	cytosol	42.31	40.55
Solyc01g103460.2.1	Tomato	cytosol	41.35	40.38
KRH49255	Soybean	nucleus	45.67	39.92
Solyc11g006480.1.1	Tomato	nucleus	33.65	39.55
PGSC0003DMT400064032	Potato	nucleus	40.38	39.07
Solyc08g007350.1.1	Tomato	cytosol	42.79	37.87
PGSC0003DMT400032474	Potato	cytosol, nucleus, vacuole	42.31	37.77
Os01t0300000-01	Rice	nucleus	35.1	36.32
Os11t0222320-00	Rice	cytosol, nucleus	23.56	36.3
GSMUA_Achr1P12990_001	Banana	plastid	32.69	35.79
PGSC0003DMT400036459	Potato	extracellular	37.02	35.65
PGSC0003DMT400032554	Potato	cytosol	41.83	34.52
KRH00112	Soybean	nucleus	33.17	34.5
Os07t0112300-00	Rice	mitochondrion	19.23	34.48
Os01t0299700-01	Rice	cytosol, peroxisome	33.17	29.11
Os01t0660500-00	Rice	mitochondrion	42.31	22.51
Os04t0129200-00	Rice	nucleus	26.44	18.46
Os07t0112400-00	Rice	mitochondrion	32.69	13.71

Protein Annotations

InterPro:3'-5'_exonuclease_dom	Gene3D:3.30.420.10	MapMan:35.1	EntrezGene:4327878	ProteinID:BAD87021.1	ProteinID:BAF06095.2
ProteinID:BAS74240.1	ProteinID:EAZ13464.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0004518
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008408	GO:GO:0009987	GO:GO:0016787
GO:GO:0090305	InterPro:IPR036397	EnsemblPlantsGene:Os01g0737600	EnsemblPlants:Os01t0737600-00	PFAM:PF01612	PANTHER:PTHR13620
PANTHER:PTHR13620:SF34	UniProt:Q5JND6	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00474	SUPFAM:SSF53098
UniParc:UPI00004C2851	RefSeq:XP_015647540.1	:	:	:	:

Description

Similar to OSIGBa0101A01.4 protein. (Os01t0737600-00)

Coordinates

chr1:+:30768475..30769182

Molecular Weight (calculated)

23555.8 Da

IEP (calculated)

4.655

GRAVY (calculated)

-0.027

Length

208 amino acids

Sequence
(BLAST)

001: MATSIVDDFG DGTYTVAFDE DYIHTTVTYS GDDVDDWLDE ILRIHRRRLN YLVVGLDVEW RPATYYHGPG PVAVLQICVG RRCLIFQILH ADYVPDSLFD
101: FLADGRFTFV GVGIHDDVAK LRSHHGLEVE NVVDLRYLAA QTIGKPALRS AGLQGLVREV MGVWAPKPYH VRVSAWDSWN LTPEQVMYAC ADAFASFEVG
201: RSLYYDYD

Best Arabidopsis Sequence Match ( AT3G12410.1 )
(BLAST)

001: MASPTIRTVA SYNTHLEYSV DFFGDEFIVT VTWDSSVISR WIRNVLFNNR FSSHPLVVGV GVQWTPFSYY SDPRPNNYYA DPPPIRYYSD NPADILQLCV
101: GNRCLIIQLG YCDQVPNNLR SFLADPETTF VGVWNGQDAG KLARCCHQLE IGELLDIRRY VTDSWGRSMR RSSFEEIVEE CMGYQGVMLD PEISMSDWTA
201: YDLDLDQILQ ASLDAYVCHQ LGVWTRLWEV

Arabidopsis Description

Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.