Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00116 | Soybean | cytosol | 51.33 | 54.98 |
| KRH00115 | Soybean | nucleus | 51.33 | 54.46 |
| KRH49260 | Soybean | cytosol, nucleus, peroxisome | 50.88 | 54.25 |
| KRH49255 | Soybean | nucleus | 56.64 | 53.78 |
| EES03384 | Sorghum | nucleus | 44.25 | 49.51 |
| VIT_08s0040g00710.t01 | Wine grape | cytosol | 44.69 | 48.56 |
| Zm00001d011507_P001 | Maize | cytosol | 42.92 | 48.02 |
| Os01t0660800-01 | Rice | nucleus | 42.04 | 47.74 |
| TraesCS5A01G007100.1 | Wheat | cytosol | 41.59 | 46.77 |
| TraesCS3A01G239600.1 | Wheat | cytosol | 40.71 | 46.7 |
| TraesCS3B01G268100.1 | Wheat | cytosol, nucleus, plastid | 40.71 | 46.7 |
| TraesCS4A01G026000.1 | Wheat | cytosol | 39.38 | 46.6 |
| TraesCS3D01G239900.1 | Wheat | cytosol, nucleus, plastid | 40.27 | 46.19 |
| Zm00001d043985_P001 | Maize | cytosol, nucleus, plastid | 40.71 | 46.0 |
| TraesCS3A01G278600.1 | Wheat | cytosol | 38.5 | 45.31 |
| Os01t0737600-00 | Rice | cytosol | 41.59 | 45.19 |
| TraesCS3A01G239500.1 | Wheat | nucleus | 39.82 | 45.0 |
| PGSC0003DMT400094103 | Potato | mitochondrion | 42.04 | 44.6 |
| TraesCS7A01G302600.1 | Wheat | cytosol | 41.15 | 44.5 |
| EES03385 | Sorghum | cytosol, nucleus, plastid | 39.38 | 44.28 |
| TraesCS3D01G278900.1 | Wheat | nucleus | 40.71 | 44.23 |
| TraesCS3B01G312800.1 | Wheat | nucleus | 40.71 | 44.23 |
| TraesCS7B01G202700.1 | Wheat | cytosol | 40.71 | 44.23 |
| TraesCS3D01G239800.1 | Wheat | nucleus | 38.94 | 44.0 |
| HORVU7Hr1G071770.1 | Barley | cytosol | 41.15 | 43.87 |
| EES01442 | Sorghum | nucleus | 39.82 | 43.27 |
| Solyc01g103460.2.1 | Tomato | cytosol | 40.27 | 42.72 |
| PGSC0003DMT400064032 | Potato | nucleus | 40.27 | 42.33 |
| Os04t0225100-01 | Rice | cytosol | 39.38 | 42.18 |
| Zm00001d043554_P001 | Maize | cytosol | 38.05 | 42.16 |
| EES01441 | Sorghum | cytosol, nucleus, plastid | 38.94 | 41.9 |
| Solyc11g006480.1.1 | Tomato | nucleus | 32.3 | 41.24 |
| HORVU3Hr1G069990.1 | Barley | nucleus | 41.15 | 40.61 |
| TraesCS6B01G430200.1 | Wheat | cytosol | 35.84 | 40.5 |
| TraesCS7D01G297900.1 | Wheat | cytosol | 33.19 | 40.11 |
| TraesCS6A01G390200.1 | Wheat | nucleus | 34.96 | 39.9 |
| KXG33324 | Sorghum | cytosol | 34.51 | 39.59 |
| EES01443 | Sorghum | cytosol | 35.4 | 39.41 |
| HORVU0Hr1G006750.1 | Barley | nucleus | 34.96 | 39.11 |
| OQU87276 | Sorghum | nucleus | 38.5 | 38.5 |
| KRH00112 | Soybean | nucleus | 33.63 | 38.0 |
| TraesCS2A01G565200.1 | Wheat | cytosol | 38.94 | 37.93 |
| EES03381 | Sorghum | nucleus | 37.61 | 37.61 |
| TraesCS2B01G625700.1 | Wheat | cytosol | 37.61 | 36.48 |
| Os01t0737700-00 | Rice | nucleus | 37.61 | 36.32 |
| GSMUA_Achr1P12990_001 | Banana | plastid | 28.76 | 34.21 |
| TraesCS3D01G239600.1 | Wheat | cytosol | 34.96 | 33.47 |
| TraesCS3B01G267900.1 | Wheat | cytosol | 36.28 | 33.33 |
| KRH36952 | Soybean | cytosol | 29.2 | 32.04 |
| KRH26003 | Soybean | nucleus | 29.2 | 31.73 |
| Os11t0222320-00 | Rice | cytosol, nucleus | 18.58 | 31.11 |
| KRH63674 | Soybean | cytosol | 21.24 | 29.09 |
| KRH11911 | Soybean | nucleus | 28.76 | 28.51 |
| KRH31568 | Soybean | mitochondrion | 21.24 | 23.65 |
| Os01t0660500-00 | Rice | mitochondrion | 40.27 | 23.27 |
| Zm00001d047288_P001 | Maize | nucleus | 19.91 | 22.28 |
| KRG97350 | Soybean | nucleus | 26.99 | 20.89 |
| Zm00001d011513_P001 | Maize | plastid | 39.38 | 20.41 |
| Zm00001d036734_P001 | Maize | nucleus | 23.01 | 19.33 |
| Zm00001d022094_P001 | Maize | nucleus | 29.65 | 15.88 |
| Zm00001d010107_P001 | Maize | nucleus | 29.65 | 6.51 |
Protein Annotations
| InterPro:3'-5'_exonuclease_dom | Gene3D:3.30.420.10 | MapMan:35.1 | UniProt:A0A0R0FA00 | EMBL:ACUP02011383 | EnsemblPlantsGene:GLYMA_18G194300 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008408 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR036397 |
| EnsemblPlants:KRH00114 | ProteinID:KRH00114 | ProteinID:KRH00114.1 | PFAM:PF01612 | PANTHER:PTHR13620 | PANTHER:PTHR13620:SF34 |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00474 | SUPFAM:SSF53098 | UniParc:UPI0006ED5A53 | : |
Description
hypothetical protein
Coordinates
chr18:-:46748075..46748755
Molecular Weight (calculated)
25749.9 Da
IEP (calculated)
7.638
GRAVY (calculated)
-0.131
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPVVTMSVV DHNLPFHTHN YNLYEVTFQC CHYDTIIHTL LTSDPSRVAS WLPNNDGVRR RNNLMVGLDV EWRPNYQPNT QPNPVATLQL CTGHRCLIFQ
101: IIHAPSIPAA LISFLANPNI TFFGVGIRAD AEKLLVDYNL HVANVRDLRP LAVERLSRAF YPDVSQAGLA TLARHVLGVA VEKPQWITRS RWDDRRLTKE
201: QVQYATIDAF LSYEIGRQLN DPSAIM
101: IIHAPSIPAA LISFLANPNI TFFGVGIRAD AEKLLVDYNL HVANVRDLRP LAVERLSRAF YPDVSQAGLA TLARHVLGVA VEKPQWITRS RWDDRRLTKE
201: QVQYATIDAF LSYEIGRQLN DPSAIM
001: MARIRRRIQK RHIHENRYID FFGERLIVTV THTTSTIRRW IHSIRFFSRL RSSHPLVVGL DVQWTPGGSD PPPDILQLCV GNRCLIIQLS HCKRIPEVLR
101: SFLEDETITF VGVWNSQDQG KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS HDQIVQASDD VYVCCKLGVK
201: ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF
101: SFLEDETITF VGVWNSQDQG KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS HDQIVQASDD VYVCCKLGVK
201: ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIH3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.