Factsheet for HORVU7Hr1G071770.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G302600.1	Wheat	cytosol	87.26	88.52
TraesCS7D01G297900.1	Wheat	cytosol	77.36	87.7
TraesCS7B01G202700.1	Wheat	cytosol	85.85	87.5
Os01t0660800-01	Rice	nucleus	62.26	66.33
Zm00001d011507_P001	Maize	cytosol	59.43	62.38
EES03384	Sorghum	nucleus	58.96	61.88
HORVU0Hr1G006750.1	Barley	nucleus	58.02	60.89
PGSC0003DMT400093830	Potato	cytosol	49.06	50.73
Solyc10g078200.1.1	Tomato	nucleus	47.64	49.27
VIT_08s0040g00710.t01	Wine grape	cytosol	48.11	49.04
Solyc08g078620.1.1	Tomato	mitochondrion	43.87	44.93
HORVU3Hr1G069990.1	Barley	nucleus	48.11	44.54
PGSC0003DMT400064032	Potato	nucleus	44.81	44.19
Solyc01g103460.2.1	Tomato	cytosol	43.87	43.66
Solyc11g006480.1.1	Tomato	nucleus	36.32	43.5
PGSC0003DMT400075613	Potato	nucleus	44.81	43.18
KRH49260	Soybean	cytosol, nucleus, peroxisome	42.92	42.92
PGSC0003DMT400094103	Potato	mitochondrion	42.45	42.25
Solyc12g094540.1.1	Tomato	cytosol	40.57	42.16
KRH00115	Soybean	nucleus	41.98	41.78
KRH00116	Soybean	cytosol	41.51	41.71
PGSC0003DMT400032474	Potato	cytosol, nucleus, vacuole	45.28	41.2
KRH00114	Soybean	cytosol	43.87	41.15
PGSC0003DMT400036459	Potato	extracellular	41.51	40.74
Solyc12g042390.1.1	Tomato	cytosol	41.51	40.55
Solyc08g007350.1.1	Tomato	cytosol	44.34	40.0
PGSC0003DMT400032554	Potato	cytosol	45.28	38.1
GSMUA_Achr1P12990_001	Banana	plastid	33.96	37.89
KRH49255	Soybean	nucleus	42.45	37.82
HORVU7Hr1G098080.1	Barley	nucleus	32.55	35.03
HORVU3Hr1G021110.1	Barley	nucleus	32.55	35.03
KRH00112	Soybean	nucleus	31.6	33.5
HORVU2Hr1G001690.1	Barley	plastid	25.0	22.75

Protein Annotations

InterPro:3'-5'_exonuclease_dom	Gene3D:3.30.420.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008408
GO:GO:0009987	GO:GO:0016787	GO:GO:0090305	EnsemblPlantsGene:HORVU7Hr1G071770	EnsemblPlants:HORVU7Hr1G071770.1	InterPro:IPR036397
UniProt:M0XD39	PFAM:PF01612	PANTHER:PTHR13620	PANTHER:PTHR13620:SF34	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SUPFAM:SSF53098	UniParc:UPI000295E180	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:398377674..398379265

Molecular Weight (calculated)

24069.6 Da

IEP (calculated)

4.716

GRAVY (calculated)

-0.163

Length

212 amino acids

Sequence
(BLAST)

001: MATDTFVTVV DFEDDEITAT VTSSGDAVKA WLRQIRYVYR WVYHKLIVGL DVEWRPSFGR AQNPVALLQL CVGRRCLIFQ LLHADFIPLA LRRFLADPDF
101: RFVGVGVQND VDRLNDDHGL EVANVVDLRS LAADEMRRPW LRQAGLKDVA GVVMGANLHK PRRVTMGPWD ACRLSQEQIQ YACIDAFVSF EDGRKLLTGD
201: YSDSEEEDDS GY

Best Arabidopsis Sequence Match ( AT3G12410.1 )
(BLAST)

001: MASPTIRTVA SYNTHLEYSV DFFGDEFIVT VTWDSSVISR WIRNVLFNNR FSSHPLVVGV GVQWTPFSYY SDPRPNNYYA DPPPIRYYSD NPADILQLCV
101: GNRCLIIQLG YCDQVPNNLR SFLADPETTF VGVWNGQDAG KLARCCHQLE IGELLDIRRY VTDSWGRSMR RSSFEEIVEE CMGYQGVMLD PEISMSDWTA
201: YDLDLDQILQ ASLDAYVCHQ LGVWTRLWEV

Arabidopsis Description

Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.