Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G327900.1 | Wheat | mitochondrion | 93.97 | 93.97 |
| TraesCS1D01G315900.1 | Wheat | mitochondrion | 82.41 | 82.41 |
| Os07t0112300-00 | Rice | mitochondrion | 29.15 | 50.0 |
| EES02313 | Sorghum | mitochondrion, plastid | 50.25 | 41.32 |
| Zm00001d018645_P001 | Maize | mitochondrion | 49.75 | 36.53 |
| OQU88309 | Sorghum | mitochondrion | 43.22 | 35.25 |
| TraesCS3A01G278600.1 | Wheat | cytosol | 32.66 | 33.85 |
| TraesCS4A01G026000.1 | Wheat | cytosol | 31.66 | 32.98 |
| TraesCS7A01G302600.1 | Wheat | cytosol | 33.67 | 32.06 |
| KRH36952 | Soybean | cytosol | 33.17 | 32.04 |
| TraesCS3A01G239600.1 | Wheat | cytosol | 31.66 | 31.98 |
| TraesCS5A01G007100.1 | Wheat | cytosol | 32.16 | 31.84 |
| TraesCS3A01G116100.1 | Wheat | mitochondrion, nucleus, plastid | 32.16 | 31.84 |
| TraesCS3A01G239500.1 | Wheat | nucleus | 30.15 | 30.0 |
| CDY50341 | Canola | cytosol | 31.66 | 28.64 |
| KRH11911 | Soybean | nucleus | 32.66 | 28.51 |
| Bra038723.1-P | Field mustard | cytosol | 31.16 | 28.18 |
| Bra038717.1-P | Field mustard | cytosol | 31.16 | 27.68 |
| Bra038722.1-P | Field mustard | cytosol | 30.15 | 27.65 |
| CDY50548 | Canola | cytosol | 30.65 | 27.23 |
| AT3G12460.1 | Thale cress | cytosol, nucleus, plastid | 32.66 | 26.86 |
| AT3G12470.1 | Thale cress | mitochondrion | 29.65 | 26.82 |
| AT2G36110.1 | Thale cress | mitochondrion | 32.16 | 26.78 |
| AT3G12430.1 | Thale cress | cytosol, nucleus, plastid | 31.66 | 26.47 |
| TraesCS2A01G565200.1 | Wheat | cytosol | 30.65 | 26.29 |
| GSMUA_Achr1P12990_001 | Banana | plastid | 24.62 | 25.79 |
| AT3G12410.1 | Thale cress | plastid | 28.64 | 24.78 |
| TraesCS6A01G390200.1 | Wheat | nucleus | 24.62 | 24.75 |
| CDY50340 | Canola | nucleus | 20.1 | 24.24 |
| CDY71159 | Canola | cytosol | 31.16 | 24.22 |
| AT3G12420.1 | Thale cress | cytosol | 22.11 | 23.78 |
| Bra038721.1-P | Field mustard | plastid | 21.11 | 22.95 |
| CDY50545 | Canola | cytosol, nucleus, plastid | 25.13 | 21.55 |
| AT3G12440.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 33.67 | 18.98 |
| CDY50339 | Canola | plastid | 15.58 | 17.32 |
| TraesCS2A01G011600.1 | Wheat | nucleus | 23.62 | 15.88 |
| TraesCS2A01G262300.1 | Wheat | cytosol, mitochondrion, nucleus | 46.23 | 15.7 |
Protein Annotations
| InterPro:3'-5'_exonuclease_dom | Gene3D:3.30.420.10 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008408 |
| GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR036397 | PFAM:PF01612 | PANTHER:PTHR13620 | PANTHER:PTHR13620:SF8 |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS1A01G315700 | EnsemblPlants:TraesCS1A01G315700.1 | TIGR:cd06141 |
Description
No Description!
Coordinates
chr1A:+:507555608..507556207
Molecular Weight (calculated)
22059.0 Da
IEP (calculated)
11.336
GRAVY (calculated)
-0.176
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRRTQQVHV AGRTTLATVT SDPAVARRWV HTARWRKVGH LRSRAELIVG MGVQWTPSFR RLSDGAEARP ATLQLCCGRR CLVFQIGRAG AGRVPLVLRR
101: FLEDGRVDFV GYNVLSDCSK LSAHYGLRVA CPQELRKVTG IGNASMESMA EQVLGWRGVK KAERVGAGNW NVSTLSKKQV RYAAADAFVA YYLGVKCLK
101: FLEDGRVDFV GYNVLSDCSK LSAHYGLRVA CPQELRKVTG IGNASMESMA EQVLGWRGVK KAERVGAGNW NVSTLSKKQV RYAAADAFVA YYLGVKCLK
001: MARIRRRIQK RHIHENRYID FFGERLIVTV THTTSTIRRW IHSIRFFSRL RSSHPLVVGL DVQWTPGGSD PPPDILQLCV GNRCLIIQLS HCKRIPEVLR
101: SFLEDETITF VGVWNSQDQG KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS HDQIVQASDD VYVCCKLGVK
201: ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF
101: SFLEDETITF VGVWNSQDQG KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS HDQIVQASDD VYVCCKLGVK
201: ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIH3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.