Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038721.1-P | Field mustard | plastid | 63.79 | 80.87 |
| CDY50339 | Canola | plastid | 56.9 | 73.74 |
| CDY50341 | Canola | cytosol | 55.17 | 58.18 |
| CDY50340 | Canola | nucleus | 40.52 | 56.97 |
| CDY50548 | Canola | cytosol | 44.83 | 46.43 |
| CDY71159 | Canola | cytosol | 44.83 | 40.62 |
| KRH36952 | Soybean | cytosol | 31.9 | 35.92 |
| KRH11911 | Soybean | nucleus | 30.6 | 31.14 |
| TraesCS1D01G315900.1 | Wheat | mitochondrion | 21.98 | 25.63 |
| TraesCS1A01G315700.1 | Wheat | mitochondrion | 21.55 | 25.13 |
| Os07t0112300-00 | Rice | mitochondrion | 12.5 | 25.0 |
| EES02313 | Sorghum | mitochondrion, plastid | 25.0 | 23.97 |
| GSMUA_Achr1P12990_001 | Banana | plastid | 18.97 | 23.16 |
| OQU88309 | Sorghum | mitochondrion | 21.12 | 20.08 |
| Zm00001d018645_P001 | Maize | mitochondrion | 22.84 | 19.56 |
| CDY01171 | Canola | nucleus | 15.95 | 13.45 |
| CDY50420 | Canola | nucleus | 15.09 | 12.73 |
| EER95744 | Sorghum | nucleus | 24.14 | 11.5 |
| Os07t0112400-00 | Rice | mitochondrion | 23.71 | 11.09 |
| TraesCS2A01G262300.1 | Wheat | cytosol, mitochondrion, nucleus | 24.14 | 9.56 |
| TraesCS2D01G261700.1 | Wheat | cytosol, mitochondrion, nucleus | 22.84 | 9.22 |
Protein Annotations
| EnsemblPlants:CDY50545 | EnsemblPlantsGene:GSBRNA2T00096972001 | Gene3D:3.30.420.10 | GO:A0A078IHU5 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR036397 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | PANTHER:PTHR13620 | PANTHER:PTHR13620:SF8 |
| ProteinID:CDY50545 | ProteinID:CDY50545.1 | SUPFAM:SSF53098 | UniParc:UPI0004EEC24F | UniProt:A0A078IHU5 | MapMan:35.2 |
Description
BnaA01g30590DBnaA01g30590D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078IHU5]
Coordinates
chrLK032922:+:3102..3820
Molecular Weight (calculated)
26589.2 Da
IEP (calculated)
9.651
GRAVY (calculated)
-0.212
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: SVIVFPSLLH ISELVKQIKW LQRSEPSRTT NLTIPLCRFL WRRFDSTLTP PTLDDGSETS SIYSHRRSRS CHPLVVGVGV QWTPHPHGIS HPRRVTTLCV
101: GTSCLIIQLS HCKRVPDIIP RFLTDPNTTF VGIRNCQDAK RLARTRHQLE IGELLDARMY VVDSQGRSLR GRSFEEIVEK CMGFRGVKLD RGISRSDWSV
201: EYLSNDQILQ VSVDAYVCFK LDVSARLWQV KF
101: GTSCLIIQLS HCKRVPDIIP RFLTDPNTTF VGIRNCQDAK RLARTRHQLE IGELLDARMY VVDSQGRSLR GRSFEEIVEK CMGFRGVKLD RGISRSDWSV
201: EYLSNDQILQ VSVDAYVCFK LDVSARLWQV KF
001: MAPTIKRIRS FRTHQKHFVD FFGDDLIVTV TPTASVIRRW IRSVRSYNRN HSVHPLVVGI GVQWRPDSSD PDPPPKTLQL CVGSRCLIIQ LGYNYGLPKV
101: LRTFLADPKT TFVGVWNGQD QKKLEKCRHR VEIGKLLDIR MFVRDSRGAR MCFCSFEQIV KERLGRVGVR LDPAICMSDW GVYNLNHYQV LQASIESYVC
201: FKLAVEERLW NLKVAANLVI
101: LRTFLADPKT TFVGVWNGQD QKKLEKCRHR VEIGKLLDIR MFVRDSRGAR MCFCSFEQIV KERLGRVGVR LDPAICMSDW GVYNLNHYQV LQASIESYVC
201: FKLAVEERLW NLKVAANLVI
Arabidopsis Description
At3g12470 [Source:UniProtKB/TrEMBL;Acc:Q9LHG1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.