Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0112400-00 | Rice | mitochondrion | 44.56 | 43.75 |
| OQU88309 | Sorghum | mitochondrion | 21.56 | 43.03 |
| EES02313 | Sorghum | mitochondrion, plastid | 20.94 | 42.15 |
| TraesCS2A01G262300.1 | Wheat | cytosol, mitochondrion, nucleus | 48.05 | 39.93 |
| TraesCS2D01G261700.1 | Wheat | cytosol, mitochondrion, nucleus | 46.0 | 38.96 |
| KRH36952 | Soybean | cytosol | 16.22 | 38.35 |
| EES03385 | Sorghum | cytosol, nucleus, plastid | 14.17 | 34.33 |
| EES03384 | Sorghum | nucleus | 14.17 | 34.16 |
| EES01441 | Sorghum | cytosol, nucleus, plastid | 14.58 | 33.81 |
| KRH11911 | Soybean | nucleus | 15.81 | 33.77 |
| EES01443 | Sorghum | cytosol | 13.96 | 33.5 |
| CDY50341 | Canola | cytosol | 14.78 | 32.73 |
| EES01442 | Sorghum | nucleus | 13.96 | 32.69 |
| Bra038717.1-P | Field mustard | cytosol | 14.99 | 32.59 |
| Bra038723.1-P | Field mustard | cytosol | 14.58 | 32.27 |
| CDY50548 | Canola | cytosol | 14.78 | 32.14 |
| KXG32361 | Sorghum | mitochondrion | 13.76 | 30.59 |
| AT3G12460.1 | Thale cress | cytosol, nucleus, plastid | 15.2 | 30.58 |
| AT2G36110.1 | Thale cress | mitochondrion | 14.99 | 30.54 |
| KXG33324 | Sorghum | cytosol | 12.32 | 30.46 |
| Bra038722.1-P | Field mustard | cytosol | 13.35 | 29.95 |
| AT3G12470.1 | Thale cress | mitochondrion | 13.35 | 29.55 |
| EES03381 | Sorghum | nucleus | 13.55 | 29.2 |
| AT3G12410.1 | Thale cress | plastid | 13.76 | 29.13 |
| GSMUA_Achr1P12990_001 | Banana | plastid | 11.29 | 28.95 |
| CDY71159 | Canola | cytosol | 15.2 | 28.91 |
| AT3G12430.1 | Thale cress | cytosol, nucleus, plastid | 13.76 | 28.15 |
| Bra038721.1-P | Field mustard | plastid | 10.47 | 27.87 |
| OQU87276 | Sorghum | nucleus | 12.53 | 26.99 |
| CDY50340 | Canola | nucleus | 9.03 | 26.67 |
| AT3G12420.1 | Thale cress | cytosol | 9.45 | 24.86 |
| CDY50545 | Canola | cytosol, nucleus, plastid | 11.5 | 24.14 |
| CDY50339 | Canola | plastid | 7.8 | 21.23 |
| AT3G12440.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 13.55 | 18.7 |
| EES11779 | Sorghum | nucleus | 8.42 | 13.18 |
Protein Annotations
| Gene3D:3.30.420.10 | MapMan:35.2 | UniProt:C5X783 | EnsemblPlants:EER95744 | ProteinID:EER95744 | ProteinID:EER95744.2 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008408 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR036397 |
| PANTHER:PTHR13620 | PANTHER:PTHR13620:SF33 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | EnsemblPlantsGene:SORBI_3002G007500 | SUPFAM:SSF53098 |
| UniParc:UPI00081AB7D1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:703524..704987
Molecular Weight (calculated)
53426.0 Da
IEP (calculated)
3.958
GRAVY (calculated)
-0.472
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDAIPVSTR LRRTTPYHDA YTVRVYDERF ASLATARPAD ARRWVATTRW LHRSLFYRGH LIVGLGVQWT PTRAQLRGET PVPATLQLCV GHRCLVFHLA
101: RADAVPEALR RFLADPRVTF VGSGAAHDGR MLWDHYGLDV ARGMELRAAA GMGNASVEQM ADRFLGYPGI CKPREVAMSV WHLPRLSLDQ VQYASVDAYL
201: AFRLGVVLLC PGAAAPPPPP ARAQHQQRAP VVQRVPAIVN PAPPRAPVVV HGAPPAAVRR QAPAPLVVVR AAPPVLFGVP VPAVGGDAVI TGSKIVADDS
301: DTESEMESYD DVFRAATRGL PVRAYASDSD YSLDSSDGFE DVRFGAFTDE EDEEDDGSYT GTGSLVADDI VGNEDDDEED EEGCDEDDDD DDEEDCNVDD
401: LEDEEGYADE DDEEGYNEDD QEEGYNHTSG AGMDGSAEVV IDGCEEEDGA LAQDDWYDHE VDYGYDQEVD FGFDQDDEQE FEEFCLL
101: RADAVPEALR RFLADPRVTF VGSGAAHDGR MLWDHYGLDV ARGMELRAAA GMGNASVEQM ADRFLGYPGI CKPREVAMSV WHLPRLSLDQ VQYASVDAYL
201: AFRLGVVLLC PGAAAPPPPP ARAQHQQRAP VVQRVPAIVN PAPPRAPVVV HGAPPAAVRR QAPAPLVVVR AAPPVLFGVP VPAVGGDAVI TGSKIVADDS
301: DTESEMESYD DVFRAATRGL PVRAYASDSD YSLDSSDGFE DVRFGAFTDE EDEEDDGSYT GTGSLVADDI VGNEDDDEED EEGCDEDDDD DDEEDCNVDD
401: LEDEEGYADE DDEEGYNEDD QEEGYNHTSG AGMDGSAEVV IDGCEEEDGA LAQDDWYDHE VDYGYDQEVD FGFDQDDEQE FEEFCLL
001: MARIRRRIQK RHIHENRYID FFGERLIVTV THTTSTIRRW IHSIRFFSRL RSSHPLVVGL DVQWTPGGSD PPPDILQLCV GNRCLIIQLS HCKRIPEVLR
101: SFLEDETITF VGVWNSQDQG KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS HDQIVQASDD VYVCCKLGVK
201: ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF
101: SFLEDETITF VGVWNSQDQG KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS HDQIVQASDD VYVCCKLGVK
201: ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIH3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.