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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G262300.1 Wheat cytosol, mitochondrion, nucleus 95.48 93.69
Os07t0112400-00 Rice mitochondrion 41.39 47.98
TraesCS1D01G315900.1 Wheat mitochondrion 16.17 46.73
EER95744 Sorghum nucleus 38.96 46.0
KRH36952 Soybean cytosol 13.39 37.38
TraesCS7D01G297900.1 Wheat cytosol 11.48 35.29
TraesCS3D01G239900.1 Wheat cytosol, nucleus, plastid 12.0 35.03
CDY50548 Canola cytosol 12.52 32.14
Bra038717.1-P Field mustard cytosol 12.52 32.14
TraesCS3D01G278900.1 Wheat nucleus 11.48 31.73
AT3G12460.1 Thale cress cytosol, nucleus, plastid 13.04 30.99
Bra038723.1-P Field mustard cytosol 11.83 30.91
KRH11911 Soybean nucleus 12.17 30.7
CDY50341 Canola cytosol 11.65 30.45
Bra038722.1-P Field mustard cytosol 11.48 30.41
AT3G12470.1 Thale cress mitochondrion 11.3 29.55
TraesCS3D01G239800.1 Wheat nucleus 10.26 29.5
AT2G36110.1 Thale cress mitochondrion 12.17 29.29
TraesCS3D01G118000.1 Wheat nucleus, peroxisome, plastid 10.09 29.0
CDY71159 Canola cytosol 12.52 28.12
CDY50340 Canola nucleus 8.0 27.88
Bra038721.1-P Field mustard plastid 8.87 27.87
AT3G12410.1 Thale cress plastid 11.13 27.83
AT3G12430.1 Thale cress cytosol, nucleus, plastid 11.48 27.73
GSMUA_Achr1P12990_001 Banana plastid 8.87 26.84
AT3G12420.1 Thale cress cytosol 8.0 24.86
TraesCS3D01G239600.1 Wheat cytosol 10.09 24.58
CDY50339 Canola plastid 7.13 22.91
CDY50545 Canola cytosol, nucleus, plastid 9.22 22.84
AT3G12440.1 Thale cress cytosol, mitochondrion, nucleus, plastid 11.48 18.7
TraesCS2D01G012000.1 Wheat nucleus 8.0 15.44
Protein Annotations
InterPro:3'-5'_exonuclease_domGene3D:3.30.420.10MapMan:35.2GO:GO:0003674GO:GO:0003676GO:GO:0003824
GO:GO:0004518GO:GO:0005488GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0008408
GO:GO:0009987GO:GO:0016787InterPro:IPR036397PFAM:PF01612PANTHER:PTHR13620PANTHER:PTHR13620:SF33
InterPro:RNaseH-like_sfInterPro:RNaseH_sfSUPFAM:SSF53098EnsemblPlantsGene:TraesCS2D01G261700EnsemblPlants:TraesCS2D01G261700.1TIGR:cd06141
SEG:seg:::::
Description
No Description!
Coordinates
chr2D:+:318257813..318259540
Molecular Weight (calculated)
62286.8 Da
IEP (calculated)
4.516
GRAVY (calculated)
-0.340
Length
575 amino acids
Sequence
(BLAST)
001: MDATPVATRL RRSTPEHDAY TVRVADRRLV ALATGHPADA RRWIYTTRWL HEALLRSGRL VVQWTPVRGR GEGPQTPPPA TLQLCAGHRC LVFHLAQVDA
101: EAVPAVLYRF LADPRVVFVG YGSSYDRRML WDHYGLDVAS ACDLRALTGM GNASVELMAQ RFLGYRGISK PRDVAMSAWH APRLSAEQVE YACVDAYLAF
201: RLGLLLCPGG YQPVQRAPAF PRAPPRAPVI AHAPPPAPAF LELHRAPGPA LVRPRAPPPA PRAPVRPRAP PPAPRALMIP RAQPPAPRAP VRPRAPPPAR
301: RAIMVPRALP PAPRAPVTPC LLSPTRRAAV NPHTPEPHLA LAPTAVAVDT AESSSKVAAL PGFTGSDTDA ELGGLGLVRS NYVYASDDDD GLSSDGYEVV
401: GRGAVTDEDE EEEDVYDYVA RTGLLSDGDY VVGPGIQSDE DEEDGYEGYF LGTGTLNAED VGEQGYAYKE YAGIGILTVE EGHNEYTGIL TVGNEAAAYE
501: DEVFVSNLHA TVVEVEVEES GLQLDVYQEP PECYDNSIEA FQVGDDGYGQ DDGGDWYDQG DDGYVQDDDS YDAFY
Best Arabidopsis Sequence Match ( AT2G36110.1 )
(BLAST)
001: MARIRRRIQK RHIHENRYID FFGERLIVTV THTTSTIRRW IHSIRFFSRL RSSHPLVVGL DVQWTPGGSD PPPDILQLCV GNRCLIIQLS HCKRIPEVLR
101: SFLEDETITF VGVWNSQDQG KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS HDQIVQASDD VYVCCKLGVK
201: ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SIH3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.