Factsheet for TraesCS2B01G428100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G407000.1	Wheat	plastid	98.26	98.26
TraesCS2A01G409700.1	Wheat	plastid	84.93	84.93
Os04t0557000-01	Rice	plastid	70.43	69.43
OQU75828	Sorghum	plastid	66.67	66.67
KXG26871	Sorghum	cytosol	19.42	55.37
Zm00001d026148_P002	Maize	endoplasmic reticulum	64.93	50.56
GSMUA_Achr5P20620_001	Banana	plastid	39.42	38.75
VIT_02s0025g03520.t01	Wine grape	cytosol	40.29	37.67
KRH59874	Soybean	plastid	40.58	37.14
KRH41172	Soybean	plastid	40.0	36.6
CDX86769	Canola	plastid	37.68	36.21
Bra035213.1-P	Field mustard	plastid	37.68	36.21
CDY13271	Canola	plastid	37.68	35.71
Solyc08g081030.1.1	Tomato	cytosol, plastid	39.13	35.53
PGSC0003DMT400031825	Potato	cytosol, plastid	38.55	35.0
AT4G11570.2	Thale cress	cytosol, plastid	36.81	34.05
TraesCS4B01G009800.1	Wheat	plastid	37.68	33.94
TraesCS1B01G132100.1	Wheat	plastid	23.48	22.75

Protein Annotations

EnsemblPlants:TraesCS2B01G428100.1	EnsemblPlantsGene:TraesCS2B01G428100	Gene3D:1.10.150.240	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023198	InterPro:IPR023214	InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF46	PFAM:PF13419
SEG:seg	SUPFAM:SSF56784	TIGR:cd07505	TIGRFAMs:TIGR01509	MapMan:7.10.5	:

Description

No Description!

Coordinates

chr2B:-:615365071..615366108

Molecular Weight (calculated)

38955.8 Da

IEP (calculated)

6.610

GRAVY (calculated)

-0.391

Length

345 amino acids

Sequence
(BLAST)

001: MISSISLLDN SHQLIHKLYR KCWPSNSNAK LNMHSTAKSG GKSMRVKMAL LKPHATDFKR NHQAHEEDNV FYKLVYRLPE SLSCLYASQK PVRKKKQQKQ
101: GTVPSNRFGV ILEWEGVVVE DDDPDLEPRV WYVLSLEEAK SFPPDEMLKE IEGMRTDQAI SEVLSWSKDA KEIERLAARK EVIYQKLRGT FYQLRPGVLD
201: FLNALVDSDI PIAVTASRPR MSLEEGIKAV GLQGYFDVVV AAEDFRRGKP EGEMFEVAAE QLGLEPDACL VMGSSNLTTE SAHTAGMRCV AVASRHPAYE
301: LQAANHVVRW LDQLSVVDLQ RLANGEVLGR RGRRSDMDME IVIEE

Best Arabidopsis Sequence Match ( AT4G11570.1 )
(BLAST)

001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF

Arabidopsis Description

PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.