Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75828 | Sorghum | plastid | 72.73 | 25.51 |
| Os04t0557000-01 | Rice | plastid | 61.98 | 21.43 |
| TraesCS2B01G428100.1 | Wheat | plastid | 55.37 | 19.42 |
| TraesCS2D01G407000.1 | Wheat | plastid | 54.55 | 19.13 |
| TraesCS2A01G409700.1 | Wheat | plastid | 54.55 | 19.13 |
| Zm00001d026148_P002 | Maize | endoplasmic reticulum | 66.12 | 18.06 |
| GSMUA_Achr5P20620_001 | Banana | plastid | 42.15 | 14.53 |
| KXG35130 | Sorghum | plastid | 39.67 | 12.57 |
| VIT_02s0025g03520.t01 | Wine grape | cytosol | 37.19 | 12.2 |
| CDY13271 | Canola | plastid | 34.71 | 11.54 |
| CDX86769 | Canola | plastid | 33.88 | 11.42 |
| Bra035213.1-P | Field mustard | plastid | 33.88 | 11.42 |
| Solyc08g081030.1.1 | Tomato | cytosol, plastid | 34.71 | 11.05 |
| AT4G11570.2 | Thale cress | cytosol, plastid | 33.88 | 10.99 |
| KRH59874 | Soybean | plastid | 33.88 | 10.88 |
| PGSC0003DMT400031825 | Potato | cytosol, plastid | 33.88 | 10.79 |
| KRH41172 | Soybean | plastid | 32.23 | 10.34 |
| KXG21417 | Sorghum | plastid | 19.83 | 6.7 |
Protein Annotations
| Gene3D:3.40.50.1000 | MapMan:35.2 | UniProt:A0A1B6PMH3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016311 | GO:GO:0016787 | GO:GO:0016791 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 |
| EnsemblPlants:KXG26871 | ProteinID:KXG26871 | ProteinID:KXG26871.1 | PFAM:PF13419 | PANTHER:PTHR18901 | PANTHER:PTHR18901:SF46 |
| EnsemblPlantsGene:SORBI_3006G175100 | SUPFAM:SSF56784 | UniParc:UPI00081ADAFD | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:53040777..53044103
Molecular Weight (calculated)
13708.7 Da
IEP (calculated)
4.833
GRAVY (calculated)
0.223
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFTNWFIDF HRTLAGCWHH QKFLKEAIYQ TLRGGYYQLR LGVLDFLNTL VGLDIPIAIA TPHSRKSLEE GIKIVGLQGY FEAIIALEDF CLGKPDGEMF
101: EVVAEQLSLE PDVCLCLVTQ T
101: EVVAEQLSLE PDVCLCLVTQ T
001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF
Arabidopsis Description
PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.