Factsheet for GSMUA_Achr5P20620_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26871	Sorghum	cytosol	14.53	42.15
GSMUA_Achr7P04430_001	Banana	plastid	38.75	39.77
TraesCS2B01G428100.1	Wheat	plastid	38.75	39.42
TraesCS2A01G409700.1	Wheat	plastid	38.46	39.13
Os04t0557000-01	Rice	plastid	38.75	38.86
TraesCS2D01G407000.1	Wheat	plastid	38.18	38.84
VIT_02s0025g03520.t01	Wine grape	cytosol	40.74	38.75
OQU75828	Sorghum	plastid	37.04	37.68
KRH59874	Soybean	plastid	39.32	36.6
Bra035213.1-P	Field mustard	plastid	37.32	36.49
CDX86769	Canola	plastid	37.32	36.49
CDY13271	Canola	plastid	37.32	35.99
KRH41172	Soybean	plastid	38.18	35.54
PGSC0003DMT400031825	Potato	cytosol, plastid	38.46	35.53
Solyc08g081030.1.1	Tomato	cytosol, plastid	38.46	35.53
GSMUA_Achr3P14430_001	Banana	cytosol	38.46	34.88
AT4G11570.2	Thale cress	cytosol, plastid	37.04	34.85
GSMUA_Achr1P17450_001	Banana	cytosol, golgi, plastid	39.32	31.58
Zm00001d026148_P002	Maize	endoplasmic reticulum	37.61	29.8
GSMUA_Achr10P...	Banana	plastid	21.37	20.83

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:7.10.5	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr5G20620_001	EnsemblPlants:GSMUA_Achr5P20620_001	EnsemblPlants:GSMUA_Achr5T20620_001	InterPro:HAD-SF_hydro_IA
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198	InterPro:IPR023214	UniProt:M0T091	PFAM:PF13419
InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF4	SUPFAM:SSF56784	TIGRFAMs:TIGR01509	TIGRFAMs:TIGR01549
UniParc:UPI0002967A1D	SEG:seg	:	:	:	:

Description

Putative Uncharacterized protein HI_0488 [Source:GMGC_GENE;Acc:GSMUA_Achr5G20620_001]

Coordinates

chr5:-:22480837..22482480

Molecular Weight (calculated)

38797.0 Da

IEP (calculated)

4.664

GRAVY (calculated)

-0.266

Length

351 amino acids

Sequence
(BLAST)

001: MAVCWAAACN PALAHNPFAE IPNRNGSSTR KKWTVSSDAG SKPCPRRSLA NSLRGCGLNA SEPAEEEHKL EQDSLPPDLG HALPANLSWL WSLSSVADDS
101: SPDPLSPPTG FRSMGVIFEL EGVIVEDDDP ELEPHAWFIL CEEEGKEFPM DVILRSIKGM KTEEAISEVL GWSKDPLVLQ RLATRKEEIY WRLRGSEYCL
201: RSGSQQFLNR LVDYGVPMAV VSARPRRSIE EAIQAVGLEG YFVCVVAAED LGRGKPDPEM FKRAAELLDL ESEHCIVIGN SDSTVVAAAN AGMSSVVVSS
301: NRPVYEFRVA PRVVRWLDEL SIGYLENSTR INPIQQRASE RHMEVEGLSY L

Best Arabidopsis Sequence Match ( AT4G11570.1 )
(BLAST)

001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF

Arabidopsis Description

PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.