Factsheet for GSMUA_Achr7P04430_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G013970.1	Barley	cytosol	17.84	60.4
GSMUA_Achr3P14430_001	Banana	cytosol	64.33	56.85
Os09t0569100-01	Rice	plastid	61.11	54.57
KXG35130	Sorghum	plastid	60.53	54.19
Zm00001d005329_P001	Maize	plastid	59.65	52.85
VIT_02s0025g03520.t01	Wine grape	cytosol	57.02	52.85
TraesCS4A01G307800.1	Wheat	plastid	58.77	52.76
TraesCS4B01G009800.1	Wheat	plastid	59.06	52.74
TraesCS4D01G006200.1	Wheat	plastid	58.77	52.48
GSMUA_Achr1P17450_001	Banana	cytosol, golgi, plastid	65.5	51.26
HORVU4Hr1G000510.1	Barley	plastid	57.89	51.16
Bra035213.1-P	Field mustard	plastid	52.05	49.58
CDX86769	Canola	plastid	52.05	49.58
CDY13271	Canola	plastid	52.63	49.45
KRH59874	Soybean	plastid	54.39	49.34
PGSC0003DMT400031825	Potato	cytosol, plastid	53.22	47.89
Solyc08g081030.1.1	Tomato	cytosol, plastid	52.92	47.63
KRH41172	Soybean	plastid	52.05	47.21
AT4G11570.2	Thale cress	cytosol, plastid	50.29	46.11
GSMUA_Achr5P20620_001	Banana	plastid	39.77	38.75
HORVU7Hr1G058150.1	Barley	plastid	25.73	28.85
GSMUA_Achr10P...	Banana	plastid	20.47	19.44

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:7.10.5	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr7G04430_001	EnsemblPlants:GSMUA_Achr7P04430_001	EnsemblPlants:GSMUA_Achr7T04430_001	InterPro:HAD-SF_hydro_IA
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198	InterPro:IPR023214	UniProt:M0TEN3	PFAM:PF13419
InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF4	SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI000296A15C
SEG:seg	:	:	:	:	:

Description

Putative Uncharacterized protein yhcW [Source:GMGC_GENE;Acc:GSMUA_Achr7G04430_001]

Coordinates

chr7:+:3362255..3363283

Molecular Weight (calculated)

38127.8 Da

IEP (calculated)

7.474

GRAVY (calculated)

-0.342

Length

342 amino acids

Sequence
(BLAST)

001: MVDAMGTGTS LIAHHLLYQR PPSEDVSFKR RQLASCRLPV PSRLMDSTVK LLAKEKNPSR QRVSGDLAYT TDSTCLSPGR TWPPVSKADD PMIHNPLLRQ
101: ERMGCGWLAV IFEWEGVIVE DDDPELEYRA WVALSQEEGK SPPLAFVLRR IEGMKSEQAI SEVLCWSRNP TEIRRLASRK EDIRQSFKNG GLCHLRSGSR
201: EFMSTLANHK IPLAVASTRR RKALQGEIEA VGAQSFFEVV VAAEEVHRGK PDPEMFIHAA RLLGFLPERC IVFGNSISTV EAAREAGMKC VAVASKQPVY
301: ELRAADLVVR RLDELSVVDL KKLADVDSPE LEPGEDRGGS QR

Best Arabidopsis Sequence Match ( AT4G11570.1 )
(BLAST)

001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF

Arabidopsis Description

PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.