Factsheet for GSMUA_Achr1P17450_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, golgi, plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plastid
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P14430_001	Banana	cytosol	65.22	73.64
GSMUA_Achr7P04430_001	Banana	plastid	51.26	65.5
Os09t0569100-01	Rice	plastid	56.29	64.23
KXG35130	Sorghum	plastid	55.84	63.87
Zm00001d005329_P001	Maize	plastid	55.15	62.44
VIT_02s0025g03520.t01	Wine grape	cytosol	51.95	61.52
TraesCS4D01G006200.1	Wheat	plastid	53.55	61.1
TraesCS4A01G307800.1	Wheat	plastid	52.86	60.63
TraesCS4B01G009800.1	Wheat	plastid	53.09	60.57
HORVU4Hr1G000510.1	Barley	plastid	53.55	60.47
KRH59874	Soybean	plastid	48.97	56.76
HORVU2Hr1G013970.1	Barley	cytosol	13.04	56.44
Bra035213.1-P	Field mustard	plastid	46.22	56.27
CDX86769	Canola	plastid	46.22	56.27
PGSC0003DMT400031825	Potato	cytosol, plastid	48.74	56.05
Solyc08g081030.1.1	Tomato	cytosol, plastid	48.51	55.79
CDY13271	Canola	plastid	46.45	55.77
KRH41172	Soybean	plastid	47.83	55.44
AT4G11570.2	Thale cress	cytosol, plastid	43.94	51.47
GSMUA_Achr5P20620_001	Banana	plastid	31.58	39.32
HORVU7Hr1G058150.1	Barley	plastid	22.88	32.79
GSMUA_Achr10P...	Banana	plastid	18.31	22.22

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:7.10.5	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr1G17450_001	EnsemblPlants:GSMUA_Achr1P17450_001	EnsemblPlants:GSMUA_Achr1T17450_001	InterPro:HAD-SF_hydro_IA
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198	InterPro:IPR023214	UniProt:M0S0Q3	PFAM:PF13419
InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF4	SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI0002965195
SEG:seg	:	:	:	:	:

Description

Putative Phosphorylated carbohydrates phosphatase TM_1254 [Source:GMGC_GENE;Acc:GSMUA_Achr1G17450_001]

Coordinates

chr1:-:12986782..12988865

Molecular Weight (calculated)

49679.6 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.272

Length

437 amino acids

Sequence
(BLAST)

001: MRYHTVSYLD GTELPDLRFL LLRLFSAVIV PRSPASDPHR SSRSLFRIQF FAMVDTIGVS TSLVGHHLFD RRPFPKEVNF KRRIDFCSLL VTEFMGQRLS
101: IGPSTSIATP RQRCNRLIGS TIRSLAMELT KEKNPSKEDW RRIAHDLDYT TDATGLSPGR LWPPANKADD PMIHNPLLRQ KRMGCGWFTV ILELEGVIVE
201: DDPELEKQAW VVLSREEGRS PPLAFVLKRI EGMKNEQAIS EVLCWSRDST ELRRLASRKE EIHQSLRNGG CYQLRCGSRE FMTTLANHKI PLAVVSTRPW
301: KILQEAIEAV GVRSFFEVIV AAEDVYRGKP DPEMFVYAAQ LLNFIPERCI VFGNSNSTVE AAHDARMKCV AVASKHPVYE LRAADLLVRR LDEISVIDLK
401: NLSDIDSPEF ASEPEVEMEE EDDPSPSSSV GVDDFFW

Best Arabidopsis Sequence Match ( AT4G11570.1 )
(BLAST)

001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF

Arabidopsis Description

PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.