Factsheet for Zm00001d005329_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35130	Sorghum	plastid	92.75	93.72
Os09t0569100-01	Rice	plastid	82.9	83.55
TraesCS4A01G307800.1	Wheat	plastid	75.65	76.64
TraesCS4B01G009800.1	Wheat	plastid	74.35	74.93
HORVU4Hr1G000510.1	Barley	plastid	74.87	74.68
TraesCS4D01G006200.1	Wheat	plastid	73.83	74.41
HORVU2Hr1G013970.1	Barley	cytosol	18.65	71.29
GSMUA_Achr3P14430_001	Banana	cytosol	61.4	61.24
GSMUA_Achr7P04430_001	Banana	plastid	52.85	59.65
VIT_02s0025g03520.t01	Wine grape	cytosol	56.22	58.81
KRH59874	Soybean	plastid	54.66	55.97
Bra035213.1-P	Field mustard	plastid	51.81	55.71
CDX86769	Canola	plastid	51.81	55.71
CDY13271	Canola	plastid	52.07	55.22
GSMUA_Achr1P17450_001	Banana	cytosol, golgi, plastid	62.44	55.15
Solyc08g081030.1.1	Tomato	cytosol, plastid	53.37	54.21
KRH41172	Soybean	plastid	52.85	54.11
PGSC0003DMT400031825	Potato	cytosol, plastid	53.11	53.95
AT4G11570.2	Thale cress	cytosol, plastid	50.26	52.01
HORVU7Hr1G058150.1	Barley	plastid	37.82	47.87
Zm00001d026148_P002	Maize	endoplasmic reticulum	33.16	28.89
Zm00001d037512_P001	Maize	cytosol	19.43	18.66

Protein Annotations

Gene3D:1.10.150.240	EntrezGene:100285779	Gene3D:3.40.50.1000	MapMan:7.10.5	UniProt:B4FI81	EMBL:BT036819
EMBL:BT063607	EMBL:EU973930	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009231
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043621	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023198	InterPro:IPR023214	ProteinID:ONM20853.1	PFAM:PF13419	InterPro:PGP-like_dom2
PANTHER:PTHR18901	PANTHER:PTHR18901:SF4	SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI00017B7087	EnsemblPlantsGene:Zm00001d005329
EnsemblPlants:Zm00001d005329_P001	EnsemblPlants:Zm00001d005329_T001	SEG:seg	:	:	:

Description

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Coordinates

chr2:-:169718350..169719510

Molecular Weight (calculated)

43037.4 Da

IEP (calculated)

6.150

GRAVY (calculated)

-0.306

Length

386 amino acids

Sequence
(BLAST)

001: MVVDTVSAST SIIAPHLFDH RSRGAGASHH HLRRTFHVVA CRPLPTAFAG RRLVARVTRQ PSSRLADWPV RALAMGVTKE VRASPRREYR GIPGDGGDMG
101: DVGVTSPTPS WPPRNRADDP KLHNPLLRLE RMGCGWLGVI FEWEGVIVED DAELERQAWL TLAQEEGKSP PPAFLLRRVE GMKNEQAISE VLCWSRDPSE
201: LRRLALRKDE IHSSLRGGSY HQMRNGSREF MSTLANYKIP IAVVTTRPRK VIEEAIEAVG VRSFFDAVVT AEDVYRGKPD PEMFLYAAQL LSFIPERCIV
301: FGNSNSAVEA AHDARMKCVA VASKHKIYEL SAADLVVKQL DELSVVDLKN LADIESPEFG MEPEPEMEEE EVPPPSTSVG IDDLFW

Best Arabidopsis Sequence Match ( AT4G11570.1 )
(BLAST)

001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF

Arabidopsis Description

PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.