CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41172	Soybean	plastid	91.51	91.51
VIT_02s0025g03520.t01	Wine grape	cytosol	74.27	75.88
PGSC0003DMT400031825	Potato	cytosol, plastid	68.7	68.16
Solyc08g081030.1.1	Tomato	cytosol, plastid	68.44	67.89
Bra035213.1-P	Field mustard	plastid	62.86	66.02
CDX86769	Canola	plastid	62.86	66.02
CDY13271	Canola	plastid	62.6	64.84
AT4G11570.2	Thale cress	cytosol, plastid	59.42	60.05
HORVU2Hr1G013970.1	Barley	cytosol	15.65	58.42
KXG35130	Sorghum	plastid	56.23	55.5
TraesCS4B01G009800.1	Wheat	plastid	56.23	55.35
Os09t0569100-01	Rice	plastid	55.97	55.09
TraesCS4D01G006200.1	Wheat	plastid	55.7	54.83
Zm00001d005329_P001	Maize	plastid	55.97	54.66
TraesCS4A01G307800.1	Wheat	plastid	55.17	54.59
GSMUA_Achr7P04430_001	Banana	plastid	49.34	54.39
HORVU4Hr1G000510.1	Barley	plastid	55.44	54.01
GSMUA_Achr3P14430_001	Banana	cytosol	54.38	52.97
GSMUA_Achr1P17450_001	Banana	cytosol, golgi, plastid	56.76	48.97
TraesCS2B01G428100.1	Wheat	plastid	37.14	40.58
TraesCS2D01G407000.1	Wheat	plastid	36.87	40.29
GSMUA_Achr5P20620_001	Banana	plastid	36.6	39.32
OQU75828	Sorghum	plastid	35.54	38.84
TraesCS2A01G409700.1	Wheat	plastid	35.01	38.26
Os04t0557000-01	Rice	plastid	34.22	36.86
KXG26871	Sorghum	cytosol	10.88	33.88
HORVU7Hr1G058150.1	Barley	plastid	24.93	30.82
Zm00001d026148_P002	Maize	endoplasmic reticulum	36.07	30.7
KRG97648	Soybean	plastid	20.95	21.64
KRH31223	Soybean	plastid	20.42	21.04

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:7.10.5	EMBL:ACUP02003342	EnsemblPlantsGene:GLYMA_05G207700	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	InterPro:HAD-SF_hydro_IA
InterPro:HAD-like_sf	InterPro:HAD_sf	UniProt:I1K6J0	InterPro:IPR023198	InterPro:IPR023214	EnsemblPlants:KRH59874
ProteinID:KRH59874	ProteinID:KRH59874.1	PFAM:PF13419	InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF4
SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI0002339867	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:38986353..38989038

Molecular Weight (calculated)

42358.8 Da

IEP (calculated)

5.548

GRAVY (calculated)

-0.308

Length

377 amino acids

Sequence
(BLAST)

001: MVESIAATSL LGHRPICGGN LTRDVSVKRK SLNTVRFPTT EFLGGGRIVV SLALPKSDKQ DRFVFSSIKA LAVELTREAH AYREEKLPNR DTKIDRGFDQ
101: RPDSWPPANR ADKPSLRNPL LRHERMGCGW LGAIFEWEGV LIEDNPDLEK QAWLALSQEE GKPSPPAFIL KRIEGMKNEQ AISEVLCWSR DPAQLRRMAN
201: RKEEIYQSLQ GGIYRFLSGS KEFVSVLMHY KIPMALVSTR PRKALESAIG EIGIEDTFSV IVAAEDVHRG KPDPEMFVYA AQLLNFIPER CIVFGNSNLT
301: VEAAHEARMK CVAVASKHPV YELGAADLVV RRLDELSVVD LKNLADIEMT EFGSVEPEME LEVEKDYGSS SVDDNFW

Best Arabidopsis Sequence Match ( AT4G11570.1 )
(BLAST)

001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF

Arabidopsis Description

PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.