Factsheet for Solyc08g081030.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031825	Potato	cytosol, plastid	98.16	98.16
VIT_02s0025g03520.t01	Wine grape	cytosol	71.05	73.17
KRH59874	Soybean	plastid	67.89	68.44
KRH41172	Soybean	plastid	66.05	66.58
Bra035213.1-P	Field mustard	plastid	60.79	64.35
CDX86769	Canola	plastid	60.79	64.35
CDY13271	Canola	plastid	60.53	63.19
AT4G11570.2	Thale cress	cytosol, plastid	58.95	60.05
HORVU2Hr1G013970.1	Barley	cytosol	15.0	56.44
GSMUA_Achr3P14430_001	Banana	cytosol	56.05	55.04
KXG35130	Sorghum	plastid	55.26	54.97
TraesCS4A01G307800.1	Wheat	plastid	53.68	53.54
Os09t0569100-01	Rice	plastid	53.95	53.52
TraesCS4B01G009800.1	Wheat	plastid	53.95	53.52
Zm00001d005329_P001	Maize	plastid	54.21	53.37
GSMUA_Achr7P04430_001	Banana	plastid	47.63	52.92
TraesCS4D01G006200.1	Wheat	plastid	52.89	52.48
HORVU4Hr1G000510.1	Barley	plastid	52.37	51.42
GSMUA_Achr1P17450_001	Banana	cytosol, golgi, plastid	55.79	48.51
OQU75828	Sorghum	plastid	35.53	39.13
TraesCS2B01G428100.1	Wheat	plastid	35.53	39.13
TraesCS2D01G407000.1	Wheat	plastid	35.26	38.84
GSMUA_Achr5P20620_001	Banana	plastid	35.53	38.46
TraesCS2A01G409700.1	Wheat	plastid	34.21	37.68
Os04t0557000-01	Rice	plastid	33.42	36.29
KXG26871	Sorghum	cytosol	11.05	34.71
Zm00001d026148_P002	Maize	endoplasmic reticulum	36.32	31.15
HORVU7Hr1G058150.1	Barley	plastid	22.63	28.2
Solyc06g050310.2.1	Tomato	plastid	19.74	20.89

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:7.10.5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009231	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0043621	InterPro:HAD-SF_hydro_IA
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198	InterPro:IPR023214	UniProt:K4CPA1	PFAM:PF13419
InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF4	SUPFAM:SSF56784	EnsemblPlantsGene:Solyc08g081030.1	EnsemblPlants:Solyc08g081030.1.1
TIGRFAMs:TIGR01509	UniParc:UPI000276BCE3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:-:64159427..64160569

Molecular Weight (calculated)

42596.0 Da

IEP (calculated)

5.030

GRAVY (calculated)

-0.291

Length

380 amino acids

Sequence
(BLAST)

001: MVESIGAISL LGRVPVYGVN CSKDVSSKRK SIDVCRLPSA DFLGRKLVCG SNLLRLRGDC VRFSLIRGQA MELTKEAFSF REDEKISKDF RYRIETDVDK
101: KPGKWPPTNK ADNPALHNPL LRQERMGCGW LAAIFEWEGV LTEDNPDLEK QAWLALSQEE GKSPPPGFIL KRIEGMKNEQ AISEVLCWSR DPVQVKRMAT
201: RKEDIYQALQ GGIYSFRPGS QEFVNTLMHY KVPMALVSTR PRKYVENAIG TIGFEGIFSV IVAAEDVHRG KPDPEMFVYA SQLLQFIPER CIVFGNSNQT
301: VEAAHDAQMK CVAVASKHPV YELGAADLVV RHLDELSIVD LKNLAAVELT EFGSPEPELE MEEEDDPYPP SAVAVDDGFW

Best Arabidopsis Sequence Match ( AT4G11570.1 )
(BLAST)

001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF

Arabidopsis Description

PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.