Factsheet for HORVU4Hr1G000510.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G006200.1	Wheat	plastid	90.96	91.91
TraesCS4A01G307800.1	Wheat	plastid	89.66	91.08
TraesCS4B01G009800.1	Wheat	plastid	88.37	89.3
HORVU2Hr1G013970.1	Barley	cytosol	20.93	80.2
KXG35130	Sorghum	plastid	74.68	75.65
Os09t0569100-01	Rice	plastid	74.68	75.46
Zm00001d005329_P001	Maize	plastid	74.68	74.87
HORVU7Hr1G058150.1	Barley	plastid	53.23	67.54
GSMUA_Achr3P14430_001	Banana	cytosol	58.66	58.66
GSMUA_Achr7P04430_001	Banana	plastid	51.16	57.89
VIT_02s0025g03520.t01	Wine grape	cytosol	53.75	56.37
KRH59874	Soybean	plastid	54.01	55.44
Bra035213.1-P	Field mustard	plastid	50.9	54.87
CDX86769	Canola	plastid	50.9	54.87
CDY13271	Canola	plastid	51.42	54.67
GSMUA_Achr1P17450_001	Banana	cytosol, golgi, plastid	60.47	53.55
KRH41172	Soybean	plastid	51.94	53.32
PGSC0003DMT400031825	Potato	cytosol, plastid	51.42	52.37
Solyc08g081030.1.1	Tomato	cytosol, plastid	51.42	52.37
AT4G11570.2	Thale cress	cytosol, plastid	50.39	52.28
HORVU1Hr1G024580.5	Barley	plastid	25.32	26.56

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:7.10.5	EMBL:AK355261	UniProt:F2CUF9	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf
InterPro:HAD_sf	EnsemblPlantsGene:HORVU4Hr1G000510	EnsemblPlants:HORVU4Hr1G000510.1	InterPro:IPR023198	InterPro:IPR023214	PFAM:PF13419
InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF4	SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI0002004876
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CUF9]

Coordinates

chrchr4H:+:735998..738078

Molecular Weight (calculated)

42449.6 Da

IEP (calculated)

5.796

GRAVY (calculated)

-0.276

Length

387 amino acids

Sequence
(BLAST)

001: MMMVDTVSAS TSFIAHHPFD HHRPKGIHAR RTLHVVSCRH LGTAFAGRRL VARVVPTRQP ARRLADWPAR ALAAVGFTKE AVPRKEFRGI PGEGDTGGLG
101: TDDAPPAATP SWPPRNRADD PSLHNPLMRL ERMGCGWVGV IFEWEGVVVE DDTRLERQAW LTLAEEEGKS PPPAFVLRRV EGMKAEHAVS EVLCWSRDPS
201: ELRRLAARKE EIHGGLRGAA SQMRDGSREF MSTLVNYKIP LAVASTRPRK AVEAAIEAVG ARGFFDAVVA AEDVYRGKPD PELFLYAAQL LGFIPERCVV
301: FGNSNSAVEA AHDARMKCVA VASKHPAYEL SAADLVVKRL DELSVVDLKN LADIDSPEFG MEPEPEMEEE EDDAPPSTAV GVDDIFL

Best Arabidopsis Sequence Match ( AT4G11570.1 )
(BLAST)

001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF

Arabidopsis Description

PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.