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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G013970.1 Barley cytosol 24.92 75.25
HORVU4Hr1G000510.1 Barley plastid 67.54 53.23
TraesCS4D01G006200.1 Wheat plastid 57.7 45.95
TraesCS4A01G307800.1 Wheat plastid 56.39 45.14
TraesCS4B01G009800.1 Wheat plastid 54.75 43.6
Zm00001d005329_P001 Maize plastid 47.87 37.82
KXG35130 Sorghum plastid 46.89 37.43
Os09t0569100-01 Rice plastid 45.9 36.55
VIT_02s0025g03520.t01 Wine grape cytosol 32.13 26.56
GSMUA_Achr7P04430_001 Banana plastid 28.85 25.73
Bra035213.1-P Field mustard plastid 30.16 25.63
CDX86769 Canola plastid 30.16 25.63
CDY13271 Canola plastid 30.49 25.55
GSMUA_Achr3P14430_001 Banana cytosol 32.13 25.32
KRH59874 Soybean plastid 30.82 24.93
KRH41172 Soybean plastid 29.51 23.87
GSMUA_Achr1P17450_001 Banana cytosol, golgi, plastid 32.79 22.88
AT4G11570.2 Thale cress cytosol, plastid 27.87 22.79
Solyc08g081030.1.1 Tomato cytosol, plastid 28.2 22.63
PGSC0003DMT400031825 Potato cytosol, plastid 27.54 22.11
HORVU1Hr1G024580.5 Barley plastid 17.05 14.09
Protein Annotations
EnsemblPlants:HORVU7Hr1G058150.1EnsemblPlantsGene:HORVU7Hr1G058150ncoils:CoilPANTHER:PTHR18901PANTHER:PTHR18901:SF4SEG:seg
UniParc:UPI000B466222UniProt:A0A287WM96MapMan:35.1:::
Description
No Description!
Coordinates
chrchr7H:-:255714716..255715633
Molecular Weight (calculated)
30726.1 Da
IEP (calculated)
11.656
GRAVY (calculated)
-0.476
Length
305 amino acids
Sequence
(BLAST)
001: MMMVDTVSAS TSFIAHHPFD HHRPKGIHAR RTLHVVSCRH LGTAFAGRRL VARVVPMRQP ARRLADWPGR ALAAVGFTKE AVPRKEFRGI PGEGDTGGLG
101: TDDAPPAATP SWPPQNRADD PSLHNPLMRL ERMGCGWVGV IFEWEGMVVE DDTRLERQAW LTLAEEEGKS PPPAFILRRV EGMKAEHAVP EVLCWSRDPS
201: ELRRLPRGRP WSRAASGTRS RARPRRATTL WWRRVPCHAP WWWWRRGRAA RPPPMRXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX IGASNKNCSL
301: ICMIY
Best Arabidopsis Sequence Match ( AT4G11570.1 )
(BLAST)
001: MAEAIGAVSL VGHRPSIVRI TVKNELKTQK SQSIVRFPVK VDYSAKGVLS HLMTQSVKKN RMSVFPIRAL AMELTKEKKK DDRLPKTWNY LDSGADDKPS
101: LWPPENKADK PSLHNPLLRQ ERMGCGWLGA IFEWEGVLIE DNPDLDNQSW LTLAQEEGKS PPPAFMLRRV EGMKNEQAIS EVLCWSRDPV QVRRMAKRKE
201: EIFKALHGGV YRLRDGSQEF VNVLMNNKIP MALVSTRPRE TLENAVGSIG IRKFFSVIVA SEDVYRGKPD PEMFIYAAQL LDFIPERCIV FGNSNQTIEA
301: AHDGRMKCVA VASKHPIYEL GAAELVVRRL DELSIIDLKK LADTDLTEFE PELEMEKEDE RELPSSAVAV DDF
Arabidopsis Description
PYRP25-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD5]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.