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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G252300.1 Wheat nucleus 100.0 100.0
TraesCS3D01G252800.1 Wheat nucleus 99.55 99.55
HORVU3Hr1G066580.1 Barley cytosol, golgi, nucleus 98.19 98.19
EES01350 Sorghum cytosol 91.86 91.86
Zm00001d011688_P001 Maize cytosol, golgi, nucleus 91.4 91.4
Os01t0707300-01 Rice plasma membrane 90.05 90.05
TraesCS1B01G380300.1 Wheat cytosol, golgi, nucleus 80.09 80.45
TraesCS1B01G380400.2 Wheat nucleus 68.33 76.65
VIT_17s0000g06580.t01 Wine grape extracellular 74.66 74.66
KRH54584 Soybean cytosol 72.4 72.4
TraesCS3B01G234600.1 Wheat cytosol 71.49 71.49
GSMUA_Achr1P11700_001 Banana cytosol, endoplasmic reticulum, peroxisome 20.36 48.91
Protein Annotations
Gene3D:1.20.5.110Gene3D:1.20.58.400MapMan:22.7.2.1ncoils:CoilGO:GO:0003674GO:GO:0005484
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005794GO:GO:0006810GO:GO:0006886GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016043GO:GO:0016192InterPro:GOSR2/Membrin/Bos1InterPro:IPR038407PFAM:PF05008PFAM:PF12352
PIRSF:PIRSF028865PANTHER:PTHR21230PANTHER:PTHR21230:SF31InterPro:SNARESUPFAM:SSF47661SUPFAM:SSF58038
TMHMM:TMhelixEnsemblPlantsGene:TraesCS3B01G283800EnsemblPlants:TraesCS3B01G283800.1InterPro:Vesicle_trsprt_v-SNARE_NTIGR:cd15862SEG:seg
InterPro:v-SNARE_N_sf:::::
Description
No Description!
Coordinates
chr3B:-:454714875..454724181
Molecular Weight (calculated)
24929.1 Da
IEP (calculated)
9.410
GRAVY (calculated)
-0.529
Length
221 amino acids
Sequence
(BLAST)
001: MSEVFEGYER QYCEESASLS RKCTAASALD GEKKKQRLSE IQSGVQEAES LIRRMDLEAR NTPPSVKAGL LAKLREYKSD LNNLKSELKR ISAPNARQTT
101: KEELLESGMA DTLAVSTDQR GRLMMTTERL NQSTDRIKES RRTMLETEEL GVSILQDLHQ QRQSLLHAHD TLHGVDDNVG KSKKILSAMS KRMDRNKWII
201: GGIISALVVA ILIILYFKLA H
Best Arabidopsis Sequence Match ( AT3G29100.3 )
(BLAST)
001: MSQGFERYER QYCEISANLS KKCTSAIALD GEQKKQNLSE IKSGVEEAEA LVKKMDLEAR NLPPNVKSSL LVKLREYKSD LNNFKTEVKR ITSGNLNATA
101: RDELLEAGMA DTLTASADQR SRLMMSTDHL GRTTDRIKDS RRTILETEEL GVSILQDLHG QRQSLLRAHE TLHGVDDNVG KSKKILTTMT RRMNRNKWTI
201: GAIITVLVLA IIFILYFKLT R
Arabidopsis Description
VTI13Vesicle transport v-SNARE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVP9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.