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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • cytosol 2
  • mitochondrion 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, golgi, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:mitochondrion
WoLF PSORT:golgi
YLoc:cytosol
 extracellular: 27664331
msms PMID: 27664331 doi
P Pérez-Bermúdez, J Blesa, JM Soriano, A Marcilla
Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P08630_001 Banana cytosol, golgi, nucleus 81.45 81.45
GSMUA_Achr6P35750_001 Banana cytosol 81.45 81.45
VIT_14s0108g01200.t01 Wine grape cytosol 81.0 81.0
KRH54584 Soybean cytosol 80.09 80.09
EES01350 Sorghum cytosol 79.19 79.19
Zm00001d011688_P001 Maize cytosol, golgi, nucleus 78.28 78.28
VIT_01s0113g00540.t01 Wine grape cytosol 77.83 78.18
Os01t0707300-01 Rice plasma membrane 76.47 76.47
HORVU3Hr1G066580.1 Barley cytosol, golgi, nucleus 74.66 74.66
TraesCS3B01G283800.1 Wheat nucleus 74.66 74.66
TraesCS3A01G252300.1 Wheat nucleus 74.66 74.66
TraesCS3D01G252800.1 Wheat nucleus 74.21 74.21
HORVU1Hr1G079430.1 Barley nucleus 71.04 71.04
TraesCS3D01G207900.1 Wheat cytosol 70.14 70.14
TraesCS1D01G368100.1 Wheat cytosol, golgi, nucleus 69.68 70.0
TraesCS1A01G363100.1 Wheat nucleus 69.68 70.0
TraesCS3A01G207400.1 Wheat cytosol, golgi, peroxisome 69.68 69.68
TraesCS3B01G234600.1 Wheat cytosol 69.68 69.68
TraesCS1B01G380300.1 Wheat cytosol, golgi, nucleus 69.23 69.55
TraesCS3D01G208300.1 Wheat cytosol, golgi, nucleus 67.87 67.87
Os01t0560200-01 Rice plasma membrane 66.97 66.97
Zm00001d011179_P001 Maize mitochondrion 66.52 66.52
EES00925 Sorghum cytosol 65.61 65.61
Zm00001d009421_P001 Maize cytosol 28.05 65.26
TraesCS1D01G368200.1 Wheat cytosol 57.47 64.47
TraesCS1B01G380400.2 Wheat nucleus 57.47 64.47
HORVU6Hr1G049030.1 Barley golgi, plasma membrane 14.03 63.27
GSMUA_Achr1P11680_001 Banana cytosol, golgi, plasma membrane 41.18 63.19
TraesCS1A01G363200.1 Wheat nucleus 55.66 62.44
Zm00001d043700_P006 Maize cytosol 64.25 58.68
GSMUA_Achr1P11700_001 Banana cytosol, endoplasmic reticulum, peroxisome 20.36 48.91
Zm00001d029400_P002 Maize cytosol 25.34 37.33
Protein Annotations
Gene3D:1.20.5.110Gene3D:1.20.58.400EntrezGene:100248505wikigene:100248505MapMan:22.7.2.1ProteinID:CCB43068
ProteinID:CCB43068.1ncoils:CoilUniProt:F6GT59EMBL:FN594950GO:GO:0000149GO:GO:0003674
GO:GO:0005484GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005768GO:GO:0005783GO:GO:0005789GO:GO:0005794GO:GO:0005829
GO:GO:0006623GO:GO:0006810GO:GO:0006886GO:GO:0006888GO:GO:0006891GO:GO:0006896
GO:GO:0008150GO:GO:0009987GO:GO:0012507GO:GO:0016020GO:GO:0016021GO:GO:0016043
GO:GO:0016192GO:GO:0031201GO:GO:0031902GO:GO:0042147GO:GO:0048280InterPro:GOSR2/Membrin/Bos1
InterPro:IPR038407EntrezGene:LOC100248505wikigene:LOC100248505PFAM:PF05008PFAM:PF12352PIRSF:PIRSF028865
PANTHER:PTHR21230PANTHER:PTHR21230:SF52InterPro:SNARESUPFAM:SSF47661SUPFAM:SSF58038TIGR:TC64517
TMHMM:TMhelixUniParc:UPI00015C8A28ArrayExpress:VIT_17s0000g06580EnsemblPlantsGene:VIT_17s0000g06580EnsemblPlants:VIT_17s0000g06580.t01InterPro:Vesicle_trsprt_v-SNARE_N
unigene:Vvi.7169RefSeq:XP_002284602RefSeq:XP_002284602.1SEG:segInterPro:v-SNARE_N_sf:
Description
No Description!
Coordinates
chr17:-:7109677..7122806
Molecular Weight (calculated)
24842.2 Da
IEP (calculated)
10.215
GRAVY (calculated)
-0.395
Length
221 amino acids
Sequence
(BLAST)
001: MSQVFEGYER QYCELSANLS RKCTAASLLN GEQKKQKVSE IKAGLDDADA LIRKMDLEAR SLQPSVKAML LAKLREYKTD LNNVKNEVKR ITSANTNQAA
101: RDNLLESGMA DTMTVSADQK TRLLMSTGRL NQSGDRIKES RRTMLETEEL GVSILQDLHQ QRQSLLHAHN TLHGVDDNIS KSKKILTAMS RRMSRNKWII
201: GSVIAALVLA IILILYFKLA H
Best Arabidopsis Sequence Match ( AT3G29100.3 )
(BLAST)
001: MSQGFERYER QYCEISANLS KKCTSAIALD GEQKKQNLSE IKSGVEEAEA LVKKMDLEAR NLPPNVKSSL LVKLREYKSD LNNFKTEVKR ITSGNLNATA
101: RDELLEAGMA DTLTASADQR SRLMMSTDHL GRTTDRIKDS RRTILETEEL GVSILQDLHG QRQSLLRAHE TLHGVDDNVG KSKKILTTMT RRMNRNKWTI
201: GAIITVLVLA IIFILYFKLT R
Arabidopsis Description
VTI13Vesicle transport v-SNARE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVP9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.