Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G056500.1 | Wheat | mitochondrion | 100.0 | 100.0 |
| TraesCS4A01G258300.1 | Wheat | cytosol | 99.04 | 99.04 |
| TraesCS6B01G331800.1 | Wheat | mitochondrion | 96.15 | 96.15 |
| HORVU4Hr1G009420.1 | Barley | mitochondrion | 95.19 | 95.19 |
| Os03t0725000-01 | Rice | mitochondrion | 89.42 | 90.29 |
| GSMUA_Achr4P07340_001 | Banana | cytosol, mitochondrion | 55.77 | 81.69 |
| VIT_04s0023g01810.t01 | Wine grape | cytosol, extracellular | 79.81 | 81.37 |
| GSMUA_Achr2P08570_001 | Banana | mitochondrion | 79.81 | 81.37 |
| Solyc02g085280.1.1 | Tomato | cytosol, extracellular | 76.92 | 78.43 |
| PGSC0003DMT400009003 | Potato | cytosol, extracellular | 76.92 | 78.43 |
| KRH55238 | Soybean | cytosol, mitochondrion | 74.04 | 75.49 |
| Bra024469.1-P | Field mustard | cytosol, mitochondrion | 73.08 | 74.51 |
| KRH34653 | Soybean | cytosol, extracellular | 73.08 | 74.51 |
| CDY65154 | Canola | cytosol, mitochondrion | 73.08 | 74.51 |
| CDY29232 | Canola | cytosol, mitochondrion | 73.08 | 74.51 |
| CDY13038 | Canola | cytosol, mitochondrion | 73.08 | 74.51 |
| Bra039612.1-P | Field mustard | cytosol, mitochondrion | 73.08 | 74.51 |
| CDY71465 | Canola | cytosol, mitochondrion | 72.12 | 73.53 |
| CDY36480 | Canola | cytosol, mitochondrion | 72.12 | 73.53 |
| KRG92137 | Soybean | cytosol, extracellular | 71.15 | 72.55 |
| AT2G18400.1 | Thale cress | cytosol, mitochondrion | 71.15 | 72.55 |
| TraesCS4B01G157100.1 | Wheat | plastid | 39.42 | 18.14 |
Protein Annotations
| MapMan:17.7.1.1.7 | Gene3D:3.90.930.12 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0019843 | InterPro:IPR036789 | PFAM:PF00347 | PRINTS:PR00059 | ScanProsite:PS00525 |
| PANTHER:PTHR11655 | PANTHER:PTHR11655:SF17 | InterPro:Ribosomal_L6 | InterPro:Ribosomal_L6_CS | InterPro:Ribosomal_L6_a/b-dom | InterPro:Ribosomal_L6_a/b-dom_sf |
| InterPro:Ribosomal_L6_bac-type | SUPFAM:SSF56053 | EnsemblPlantsGene:TraesCS4B01G056100 | EnsemblPlants:TraesCS4B01G056100.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr4B:+:45206317..45206631
Molecular Weight (calculated)
11836.7 Da
IEP (calculated)
10.689
GRAVY (calculated)
-0.304
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKFFRFLK LVGVGFKART EQGGRELFLK LGYSHEVQFT APPAVRVFCF KPNIICCTGI DKHRVHHFAG AVRSSKPPEV YKGKGILYID EVIKLKPGKK
101: QQKK
101: QQKK
001: MEAKFFRFLK IVGVGYKARA EEAGRFLYLK LGYSHEVELA VPPAVRVFCF KNNVVCCTGI DKQRVHQFAA TVRSCKPPEP YKGKGIMYTD EVVKKKQGKK
101: SK
101: SK
Arabidopsis Description
Putative ribosomal protein L6 [Source:UniProtKB/TrEMBL;Acc:Q9ZPX2]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.