Factsheet for Os03t0725000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G282100.1	Wheat	mitochondrion	93.2	92.31
TraesCS6B01G331800.1	Wheat	mitochondrion	93.2	92.31
TraesCS6A01G302600.1	Wheat	mitochondrion	93.2	92.31
EES01089	Sorghum	cytosol, mitochondrion	92.23	92.23
HORVU4Hr1G009420.1	Barley	mitochondrion	91.26	90.38
EES07474	Sorghum	cytosol, mitochondrion	90.29	90.29
TraesCS4D01G056500.1	Wheat	mitochondrion	90.29	89.42
TraesCS4B01G056100.1	Wheat	mitochondrion	90.29	89.42
TraesCS4A01G258300.1	Wheat	cytosol	89.32	88.46
GSMUA_Achr4P07340_001	Banana	cytosol, mitochondrion	59.22	85.92
Zm00001d051422_P001	Maize	mitochondrion	86.41	85.58
TraesCS5A01G097400.1	Wheat	cytosol, mitochondrion	82.52	84.16
GSMUA_Achr2P08570_001	Banana	mitochondrion	82.52	83.33
VIT_04s0023g01810.t01	Wine grape	cytosol, extracellular	81.55	82.35
HORVU5Hr1G026360.7	Barley	cytosol, mitochondrion	81.55	81.55
Solyc02g085280.1.1	Tomato	cytosol, extracellular	79.61	80.39
PGSC0003DMT400009003	Potato	cytosol, extracellular	79.61	80.39
KRH55238	Soybean	cytosol, mitochondrion	76.7	77.45
KRH34653	Soybean	cytosol, extracellular	75.73	76.47
Bra024469.1-P	Field mustard	cytosol, mitochondrion	74.76	75.49
CDY65154	Canola	cytosol, mitochondrion	74.76	75.49
CDY29232	Canola	cytosol, mitochondrion	74.76	75.49
CDY13038	Canola	cytosol, mitochondrion	74.76	75.49
Bra039612.1-P	Field mustard	cytosol, mitochondrion	74.76	75.49
KRG92137	Soybean	cytosol, extracellular	73.79	74.51
CDY71465	Canola	cytosol, mitochondrion	73.79	74.51
CDY36480	Canola	cytosol, mitochondrion	73.79	74.51
AT2G18400.1	Thale cress	cytosol, mitochondrion	72.82	73.53
HORVU6Hr1G075100.7	Barley	cytosol	93.2	67.13
Os03t0751400-01	Rice	plastid	39.81	18.14
Os03t0356300-01	Rice	nucleus	38.84	17.7

Protein Annotations

MapMan:17.7.1.1.7	Gene3D:3.90.930.12	EntrezGene:4333960	ProteinID:AAT77075.1	ProteinID:ABF98628.1	ProteinID:ABF98629.1
EMBL:AK059294	EMBL:AK119694	ProteinID:BAF13040.1	ProteinID:BAS86159.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0019843	InterPro:IPR036789	EnsemblPlantsGene:Os03g0725000
EnsemblPlants:Os03t0725000-01	PFAM:PF00347	PRINTS:PR00059	ScanProsite:PS00525	PANTHER:PTHR11655	PANTHER:PTHR11655:SF17
UniProt:Q6AU10	InterPro:Ribosomal_L6	InterPro:Ribosomal_L6_CS	InterPro:Ribosomal_L6_a/b-dom	InterPro:Ribosomal_L6_a/b-dom_sf	InterPro:Ribosomal_L6_bac-type
SUPFAM:SSF56053	UniParc:UPI00003FE6AD	RefSeq:XP_015627922.1	:	:	:

Description

mitochondrial ribosomal protein L6-1Mitochondrial 60S ribosomal protein L6. (Os03t0725000-01);Mitochondrial 60S ribosomal protein L6. (Os03t0725000-02)

Coordinates

chr3:+:29462922..29465646

Molecular Weight (calculated)

11741.7 Da

IEP (calculated)

10.587

GRAVY (calculated)

-0.281

Length

103 amino acids

Sequence
(BLAST)

001: MEAKVFRFLK LVGVGFKART EREGRELFLK LGYSHEVQFT APPAVRVFCF KPNLICCTGI DKNRVHNFAG AVRNCKPPEV YKGKGILYID EVIKLKPGKK
101: QKK

Best Arabidopsis Sequence Match ( AT2G18400.1 )
(BLAST)

001: MEAKFFRFLK IVGVGYKARA EEAGRFLYLK LGYSHEVELA VPPAVRVFCF KNNVVCCTGI DKQRVHQFAA TVRSCKPPEP YKGKGIMYTD EVVKKKQGKK
101: SK

Arabidopsis Description

Putative ribosomal protein L6 [Source:UniProtKB/TrEMBL;Acc:Q9ZPX2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.