Factsheet for TraesCS5A01G301600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G306500.1	Wheat	plastid	87.8	95.68
TraesCS5B01G299100.1	Wheat	plastid	86.89	89.62
TraesCS5A01G277400.1	Wheat	mitochondrion	51.22	63.64
TraesCS3A01G206300.1	Wheat	plastid	42.99	41.59
TraesCS3A01G251300.1	Wheat	cytosol, mitochondrion, plastid	41.16	40.06
TraesCS7A01G061900.2	Wheat	cytosol	37.2	36.42
TraesCS6A01G187900.2	Wheat	cytosol	37.2	36.42
TraesCS4A01G428000.1	Wheat	mitochondrion	36.59	31.17
TraesCS7A01G495700.1	Wheat	cytosol, plastid	19.51	30.33
TraesCS4A01G427000.1	Wheat	mitochondrion	33.54	29.41
TraesCS1A01G425000.1	Wheat	cytosol	31.4	29.1
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	27.44	27.36
TraesCS4A01G093400.1	Wheat	cytosol	28.35	27.19
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	22.87	22.32
TraesCS1A01G115500.1	Wheat	golgi	28.05	22.28
TraesCS3A01G181500.1	Wheat	golgi	26.52	22.19
TraesCS6A01G175100.1	Wheat	plastid	28.05	21.25
TraesCS5A01G274600.1	Wheat	cytosol, plastid	22.26	19.06
TraesCS7A01G252500.1	Wheat	cytosol	21.34	19.02
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.39	18.91
TraesCS7A01G376600.1	Wheat	cytosol, plastid	27.74	17.5

Protein Annotations

EnsemblPlants:TraesCS5A01G301600.1	EnsemblPlantsGene:TraesCS5A01G301600	Gene3D:1.50.40.10	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF245	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	SEG:seg	SUPFAM:SSF103506
TMHMM:TMhelix	MapMan:24.2.13	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:510463797..510465383

Molecular Weight (calculated)

33795.3 Da

IEP (calculated)

10.722

GRAVY (calculated)

0.208

Length

328 amino acids

Sequence
(BLAST)

001: MADPTPTRAG TRTSGMAARS GAMFDTAVAS TPAYAREMLA GGVAGVAAKT AVASLGRVKL LCRTGGEPGG VGAVRTLVGI YRREGVAGLY RGNGANALRV
101: FPSKALHFAA YERYRGWLLA ATAAPSSSVV DLLAGSAAGG TALLATYPLE LTRARLACGG DAARTSVHGV LRAAYAEGGG VRGLYRGACP ALARALPRAG
201: IKFGAYEWLK RRLPEGCDGR ADAQLACGVA AAQLASTATY PLGVVRRRMQ LGLATGGVLQ GIRAIAREEG MRRLYAGLGI AYVKAVPAAA IGLAAYDQMK
301: LLLNCRPVAT ARVFTHPRLA GGEYVVCW

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.