Factsheet for TraesCS4A01G428000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G056700.1	Wheat	cytosol	82.86	93.0
TraesCS7A01G061900.2	Wheat	cytosol	79.22	91.04
TraesCS6A01G187900.2	Wheat	cytosol	77.66	89.25
HORVU6Hr1G042080.7	Barley	cytosol	76.62	87.8
KXG29836	Sorghum	cytosol, mitochondrion, plastid	69.35	79.46
TraesCS4A01G427000.1	Wheat	mitochondrion	77.14	79.41
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	68.57	78.81
GSMUA_Achr10P...	Banana	cytosol	61.56	68.3
Solyc12g008770.1.1	Tomato	extracellular	57.92	65.98
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	60.78	65.55
PGSC0003DMT400000910	Potato	cytosol	58.18	65.5
VIT_11s0016g02470.t01	Wine grape	cytosol	57.4	64.81
KRH49045	Soybean	cytosol	53.77	64.09
GSMUA_Achr7P09310_001	Banana	cytosol	56.88	63.29
AT4G26180.1	Thale cress	cytosol	53.77	62.54
CDY68466	Canola	cytosol	53.77	62.16
Bra026457.1-P	Field mustard	cytosol	53.77	61.98
CDX94361	Canola	cytosol	53.77	61.98
TraesCS3A01G206300.1	Wheat	plastid	46.49	52.8
TraesCS3A01G251300.1	Wheat	cytosol, mitochondrion, plastid	43.9	50.15
TraesCS5A01G277400.1	Wheat	mitochondrion	29.87	43.56
TraesCS5A01G301600.1	Wheat	plastid	31.17	36.59
TraesCS1A01G425000.1	Wheat	cytosol	30.91	33.62
TraesCS7A01G495700.1	Wheat	cytosol, plastid	17.14	31.28
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	24.68	28.88
TraesCS4A01G093400.1	Wheat	cytosol	25.19	28.36
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	23.12	26.49
TraesCS3A01G181500.1	Wheat	golgi	24.68	24.23
TraesCS1A01G115500.1	Wheat	golgi	23.64	22.03
TraesCS7A01G252500.1	Wheat	cytosol	20.52	21.47
TraesCS6A01G175100.1	Wheat	plastid	23.9	21.25
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	23.12	21.04
TraesCS7A01G376600.1	Wheat	cytosol, plastid	25.97	19.23
TraesCS5A01G274600.1	Wheat	cytosol, plastid	18.7	18.8

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085
InterPro:Graves_DC	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00928	PFscan:PS50920	PFscan:PS51257	PANTHER:PTHR24089
PANTHER:PTHR24089:SF245	SUPFAM:SSF103506	EnsemblPlantsGene:TraesCS4A01G428000	EnsemblPlants:TraesCS4A01G428000.1	SEG:seg	:

Description

No Description!

Coordinates

chr4A:-:698886265..698889429

Molecular Weight (calculated)

42023.1 Da

IEP (calculated)

10.173

GRAVY (calculated)

-0.040

Length

385 amino acids

Sequence
(BLAST)

001: MGPSPGRPLR TERTHTQFTF VSLCSCASTA RASALLPPSL HRGVRAGTTT QAAAGVMEEA ERGGWAVPLA VRELIAGGVA GGVAKCAVAP LERVKILLQT
101: RRAEFRGSGL IGSFQTIYRT EGPLGFYRGN GASVARIVPY AALHYMAYEE YRRWIILGFP NVQQGPVLDL VAGSIAGGTA VVSTYPLDLV RTKMAYQLQV
201: KDAVNLSLRV PSEQVYKGIL DCLKTVYRQN GLKGLYRGMG PSLYGIFPYS GLKFYFYEKM KTRVPKEHRK DIIPKLACGS VAGLLGQTIT YPLDVVRRQM
301: QVQALSLSNQ VNRKETFGSL AMIVKHQGWK QLFSGLSINY LKVVPSAALG FTVYDSMRDW LNVPSREQAP VLSEDGSDTA PVHSS

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.