Factsheet for HORVU6Hr1G042080.7

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G176300.3	Wheat	cytosol	96.43	96.72
TraesCS6B01G231800.3	Wheat	cytosol	95.83	96.12
TraesCS6A01G187900.2	Wheat	cytosol	95.83	96.12
TraesCS7A01G061900.2	Wheat	cytosol	89.88	90.15
TraesCS7D01G056700.1	Wheat	cytosol	91.96	90.09
KXG29836	Sorghum	cytosol, mitochondrion, plastid	84.82	84.82
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	83.93	84.18
TraesCS4A01G428000.1	Wheat	mitochondrion	87.8	76.62
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	75.3	70.87
TraesCS4A01G427000.1	Wheat	mitochondrion	77.98	70.05
GSMUA_Achr10P...	Banana	cytosol	71.73	69.45
Solyc12g008770.1.1	Tomato	extracellular	67.56	67.16
VIT_11s0016g02470.t01	Wine grape	cytosol	67.86	66.86
PGSC0003DMT400000910	Potato	cytosol	67.26	66.08
KRH49045	Soybean	cytosol	62.8	65.33
Bra026457.1-P	Field mustard	cytosol	63.69	64.07
CDX94361	Canola	cytosol	63.69	64.07
AT4G26180.1	Thale cress	cytosol	63.1	64.05
CDY68466	Canola	cytosol	63.39	63.96
GSMUA_Achr7P09310_001	Banana	cytosol	65.48	63.58
HORVU3Hr1G049720.4	Barley	cytosol, peroxisome, plastid	54.76	54.28
HORVU3Hr1G066850.4	Barley	mitochondrion	45.54	44.35
HORVU1Hr1G092860.1	Barley	cytosol	34.52	32.77
HORVU4Hr1G060540.1	Barley	cytosol	29.76	29.24
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	28.57	25.81
HORVU3Hr1G098170.1	Barley	mitochondrion	27.08	23.95
HORVU3Hr1G037170.3	Barley	plastid	29.46	23.35
HORVU5Hr1G074710.1	Barley	mitochondrion	21.43	22.78
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	27.08	22.03
HORVU7Hr1G111040.2	Barley	cytosol	26.79	21.33
HORVU4Hr1G078650.2	Barley	peroxisome	25.6	20.57
HORVU7Hr1G090020.9	Barley	mitochondrion	29.46	18.93
HORVU5Hr1G074670.1	Barley	mitochondrion	21.43	18.6

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A287U1G8	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0008150	GO:GO:0015228	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:1990559
EnsemblPlantsGene:HORVU6Hr1G042080	EnsemblPlants:HORVU6Hr1G042080.7	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF245
SUPFAM:SSF103506	UniParc:UPI000B481079	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:233583176..233587432

Molecular Weight (calculated)

36661.8 Da

IEP (calculated)

10.181

GRAVY (calculated)

0.039

Length

336 amino acids

Sequence
(BLAST)

001: MEAAERGGGL LPVAVRELIA GGVAGGVAKS AVAPLERVKI LLQQTRRVEF RGSGLVGSFR TIYRTEGPLG FYRGNGASVA RIVPYAALHY MAYEEYRRWI
101: ILGFPNVEQG PVLDLVSGSI AGGTAVVSTY PLDLVRTKLA YQLQVKGAVN LSLRESKPSE QVYKGILDCV KTIHRQNGLK GLYRGMAPSL YGIFPYSGLK
201: FYFYEKMKTN VPEEHRKDII PKLACGSVAG LLGQTITYPL DVVRRQMQVQ VFSSSNLVKG KGTFGSLVMI AKHQGWKQLF SGLSINYLKV VPSVAIGFTV
301: YDSMKDWLNV PSRERAAVVV PVLSEDGSNT APVHSS

Best Arabidopsis Sequence Match ( AT4G26180.1 )
(BLAST)

001: MAEGEEKNGI IDSIPLFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLVGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T

Arabidopsis Description

COAC2Mitochondrial carrier protein CoAc2 [Source:UniProtKB/Swiss-Prot;Acc:F4JU70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.