Factsheet for TraesCS6D01G176300.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G231800.3	Wheat	cytosol	98.81	98.81
TraesCS6A01G187900.2	Wheat	cytosol	98.81	98.81
HORVU6Hr1G042080.7	Barley	cytosol	96.72	96.43
TraesCS7D01G056700.1	Wheat	cytosol	94.33	92.13
KXG29836	Sorghum	cytosol, mitochondrion, plastid	86.57	86.31
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	85.67	85.67
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	76.72	71.99
GSMUA_Achr10P...	Banana	cytosol	73.13	70.61
Solyc12g008770.1.1	Tomato	extracellular	68.36	67.75
VIT_11s0016g02470.t01	Wine grape	cytosol	68.66	67.45
PGSC0003DMT400000910	Potato	cytosol	68.66	67.25
KRH49045	Soybean	cytosol	63.88	66.25
AT4G26180.1	Thale cress	cytosol	64.48	65.26
GSMUA_Achr7P09310_001	Banana	cytosol	66.87	64.74
Bra026457.1-P	Field mustard	cytosol	64.48	64.67
CDX94361	Canola	cytosol	64.48	64.67
CDY68466	Canola	cytosol	64.18	64.56
TraesCS3D01G209300.1	Wheat	plastid	55.52	54.87
TraesCS3D01G251700.1	Wheat	cytosol, mitochondrion, plastid	52.24	51.93
TraesCS5D01G306500.1	Wheat	plastid	36.12	40.2
TraesCS1D01G434000.1	Wheat	cytosol	34.93	33.05
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	28.66	29.18
TraesCS4D01G211700.2	Wheat	cytosol	29.55	28.86
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	26.57	26.49
TraesCS3D01G186300.1	Wheat	mitochondrion	29.85	25.51
TraesCS1D01G116900.1	Wheat	cytosol	27.76	22.41
TraesCS7D01G483000.1	Wheat	cytosol	28.06	22.22
TraesCS6D01G168200.1	Wheat	golgi	28.36	22.14
TraesCS7D01G250600.1	Wheat	cytosol	22.99	21.15
TraesCS4D01G304600.1	Wheat	peroxisome	26.27	20.95
TraesCS5D01G282200.1	Wheat	cytosol	22.39	19.58
TraesCS7D01G372900.1	Wheat	cytosol, plastid	30.15	19.46

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085
InterPro:Graves_DC	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00928	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF245
SUPFAM:SSF103506	EnsemblPlantsGene:TraesCS6D01G176300	EnsemblPlants:TraesCS6D01G176300.3	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:+:170961958..170965747

Molecular Weight (calculated)

36382.4 Da

IEP (calculated)

10.030

GRAVY (calculated)

0.057

Length

335 amino acids

Sequence
(BLAST)

001: MEAAERGGGA LPLAVRELIA GGVAGGVAKS AVAPLERVKI LLQTRRAEFR GSGLVGSFRT IYQTEGPLGF YRGNGASVAR IVPYAALHYM AYEEYRRWII
101: LGFPNVEQGP VLDLVAGSIA GGTAVVSTYP LDLVRTKLAY QLQVKGAVNV SLRESKPSEQ VYKGILDCVK TIYRQNGLKG LYRGMAPSLY GIFPYSGLKF
201: YFYEKMKTHV PEEHRKDIIP KLACGSVAGL LGQTITYPLD VVRRQMQVQA FSSSNLVKGK GTFGSLVMIA KHQGWKQLFS GLSINYLKVV PSVAIGFTVY
301: DSMKDWLNVP SREQAAVVVP VLSEDGSNAA PVHSS

Best Arabidopsis Sequence Match ( AT4G26180.1 )
(BLAST)

001: MAEGEEKNGI IDSIPLFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLVGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T

Arabidopsis Description

COAC2Mitochondrial carrier protein CoAc2 [Source:UniProtKB/Swiss-Prot;Acc:F4JU70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.