Factsheet for TraesCS1D01G116900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G115500.1	Wheat	golgi	96.87	97.34
TraesCS1B01G135400.1	Wheat	cytosol	95.42	96.12
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	94.46	94.92
Zm00001d009799_P001	Maize	plastid	83.13	84.98
Zm00001d037640_P001	Maize	plastid	82.89	84.73
EES17800	Sorghum	cytosol	83.61	82.82
Os05t0171300-01	Rice	mitochondrion, plastid	81.93	81.93
KRH15889	Soybean	endoplasmic reticulum	42.65	74.06
GSMUA_Achr7P10070_001	Banana	cytosol	66.02	70.98
GSMUA_Achr7P10000_001	Banana	mitochondrion	39.76	70.82
CDX68843	Canola	cytosol	21.2	67.18
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	64.58	66.67
TraesCS7D01G483000.1	Wheat	cytosol	66.99	65.72
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	61.69	64.32
Solyc08g061090.2.1	Tomato	plastid	60.96	63.57
VIT_11s0016g05110.t01	Wine grape	cytosol	61.2	63.5
VIT_04s0008g05240.t01	Wine grape	cytosol	60.72	63.48
CDX68841	Canola	cytosol	56.87	62.6
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	60.96	61.86
AT4G32400.1	Thale cress	cytosol	58.07	61.48
CDX75241	Canola	cytoskeleton, cytosol, nucleus	56.14	60.99
Bra011344.1-P	Field mustard	cytosol	55.9	60.73
Bra007793.1-P	Field mustard	cytosol	58.07	60.55
CDY11524	Canola	cytosol	58.07	60.55
CDX76755	Canola	cytosol	57.83	60.45
KRH52458	Soybean	extracellular	55.42	58.82
KRH61786	Soybean	cytosol, nucleus, plastid	54.94	58.31
GSMUA_Achr10P...	Banana	endoplasmic reticulum	62.41	57.94
KRH05133	Soybean	mitochondrion	57.59	57.18
TraesCS6D01G168200.1	Wheat	golgi	55.9	54.08
TraesCS5D01G282200.1	Wheat	cytosol	33.01	35.77
TraesCS7D01G250600.1	Wheat	cytosol	29.88	34.07
TraesCS1D01G434000.1	Wheat	cytosol	26.02	30.51
TraesCS5D01G306500.1	Wheat	plastid	21.69	29.9
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	23.37	28.87
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	22.65	28.57
TraesCS6D01G176300.3	Wheat	cytosol	22.41	27.76
TraesCS4D01G304600.1	Wheat	peroxisome	27.95	27.62
TraesCS4D01G211700.2	Wheat	cytosol	22.41	27.11
TraesCS7D01G056700.1	Wheat	cytosol	22.41	27.11
TraesCS3D01G251700.1	Wheat	cytosol, mitochondrion, plastid	21.69	26.71
TraesCS3D01G209300.1	Wheat	plastid	21.45	26.25
TraesCS3D01G186300.1	Wheat	mitochondrion	22.17	23.47
TraesCS7D01G372900.1	Wheat	cytosol, plastid	27.71	22.16

Protein Annotations

EnsemblPlants:TraesCS1D01G116900.1	EnsemblPlantsGene:TraesCS1D01G116900	Gene3D:1.50.40.10	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF358	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	SEG:seg	SUPFAM:SSF103506
MapMan:24.2.13	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:112767428..112770035

Molecular Weight (calculated)

44245.6 Da

IEP (calculated)

9.518

GRAVY (calculated)

0.016

Length

415 amino acids

Sequence
(BLAST)

001: MSNKSGSVRL QCAEATAADW GCCFLSLSVP PPPPAAPCDA DSNCGFNLAW TLHQSFHPPA GLFASVGHKV GVGFPASSSS SGATSSGNPQ DPYRKYVSPE
101: AVETSLPVPG DGVGLRGKGK KKAVRIKIKV GNSHLKRLIS GGIAGAVSRT VVAPLETIRT HLMVGSNGNS STEVFESIMK NEGWTGLFRG NFVNVIRVAP
201: SKAIELFAFD TAKKFLTPKS GEERRIPIPP SLVAGAFAGV SSTLCTYPLE LIKTRLTIQR GVYDNFLHAF VKIVREEGPA ELYRGLTPSL IGVVPYAATN
301: YFAYDTLKKV YKKMFKTNEI SNVPTLLIGS AAGAISSTAT FPLEVARKHM QVGAVGGRKV YKNMLHALLT ILEDEGVGGL YRGLGPSCMK LVPAAGISFM
401: CYEACKKILI EEEDE

Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)

001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA

Arabidopsis Description

BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.