Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011344.1-P | Field mustard | cytosol | 99.74 | 99.74 |
| CDX68841 | Canola | cytosol | 95.03 | 96.29 |
| AT4G32400.1 | Thale cress | cytosol | 89.53 | 87.24 |
| CDX68843 | Canola | cytosol | 29.84 | 87.02 |
| CDY11524 | Canola | cytosol | 82.2 | 78.89 |
| CDX76755 | Canola | cytosol | 81.68 | 78.59 |
| KRH15889 | Soybean | endoplasmic reticulum | 46.6 | 74.48 |
| TraesCS7A01G495700.1 | Wheat | cytosol, plastid | 38.48 | 69.67 |
| VIT_04s0008g05240.t01 | Wine grape | cytosol | 70.42 | 67.76 |
| Solyc08g061090.2.1 | Tomato | plastid | 70.42 | 67.59 |
| PGSC0003DMT400053564 | Potato | cytosol, nucleus, plastid | 69.9 | 67.09 |
| KRH52458 | Soybean | extracellular | 67.28 | 65.73 |
| KRH61786 | Soybean | cytosol, nucleus, plastid | 66.23 | 64.71 |
| KRH05133 | Soybean | mitochondrion | 67.02 | 61.24 |
| GSMUA_Achr7P10070_001 | Banana | cytosol | 61.26 | 60.62 |
| Zm00001d009799_P001 | Maize | plastid | 62.3 | 58.62 |
| Os05t0171300-01 | Rice | mitochondrion, plastid | 62.83 | 57.83 |
| Zm00001d037640_P001 | Maize | plastid | 61.26 | 57.64 |
| HORVU1Hr1G025480.1 | Barley | nucleus, peroxisome, vacuole | 62.04 | 57.38 |
| TraesCS1A01G115500.1 | Wheat | golgi | 61.52 | 56.9 |
| GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 59.42 | 56.47 |
| TraesCS1B01G135400.1 | Wheat | cytosol | 60.73 | 56.31 |
| TraesCS1D01G116900.1 | Wheat | cytosol | 60.99 | 56.14 |
| EES17800 | Sorghum | cytosol | 61.26 | 55.85 |
| Os06t0602700-01 | Rice | plastid | 61.52 | 55.56 |
| Zm00001d046400_P002 | Maize | mitochondrion | 59.95 | 54.52 |
| GSMUA_Achr7P10000_001 | Banana | mitochondrion | 33.25 | 54.51 |
| EER90006 | Sorghum | plastid | 59.95 | 54.39 |
| TraesCS7D01G483000.1 | Wheat | cytosol | 60.21 | 54.37 |
| TraesCS7B01G401600.1 | Wheat | cytosol | 60.21 | 54.25 |
| HORVU7Hr1G111040.2 | Barley | cytosol | 59.69 | 54.03 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 59.42 | 50.78 |
| Os02t0202400-01 | Rice | plastid | 56.28 | 50.59 |
| TraesCS6B01G210000.1 | Wheat | plastid | 56.28 | 50.12 |
| TraesCS6D01G168200.1 | Wheat | golgi | 55.76 | 49.65 |
| TraesCS6A01G175100.1 | Wheat | plastid | 56.02 | 49.42 |
| EES04720 | Sorghum | plastid | 54.19 | 47.59 |
| Zm00001d015746_P001 | Maize | plastid | 53.14 | 46.45 |
| CDY29805 | Canola | cytosol | 31.15 | 34.2 |
| CDY25400 | Canola | cytosol, plastid | 31.15 | 34.2 |
| CDY01954 | Canola | mitochondrion | 17.54 | 34.01 |
| CDX82257 | Canola | cytosol | 30.89 | 33.91 |
| CDY36050 | Canola | cytosol, plastid | 30.37 | 33.33 |
| CDY07175 | Canola | cytosol | 30.1 | 32.86 |
| CDY48505 | Canola | cytosol | 30.1 | 32.86 |
| CDX71722 | Canola | cytosol | 28.8 | 32.54 |
| CDY11371 | Canola | cytosol | 28.8 | 32.45 |
| CDX91877 | Canola | cytosol | 29.84 | 32.29 |
| CDX74363 | Canola | cytosol | 29.84 | 32.29 |
| CDY59491 | Canola | cytosol | 27.23 | 30.59 |
| CDX70930 | Canola | cytosol | 15.45 | 30.41 |
| CDY66909 | Canola | cytosol, mitochondrion, plastid | 9.69 | 30.33 |
| CDY07764 | Canola | plastid | 26.96 | 30.29 |
| CDY68466 | Canola | cytosol | 26.18 | 30.03 |
| CDX94361 | Canola | cytosol | 26.18 | 29.94 |
| CDY18420 | Canola | plastid | 26.44 | 29.28 |
| CDX84024 | Canola | cytosol | 25.13 | 29.18 |
| CDX96850 | Canola | cytosol | 25.13 | 29.0 |
| CDX93344 | Canola | plastid | 26.18 | 28.99 |
| CDY40244 | Canola | plastid | 25.39 | 28.96 |
| CDY13155 | Canola | cytosol | 26.44 | 28.86 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 24.61 | 28.75 |
| CDY56673 | Canola | cytosol | 25.39 | 28.61 |
| CDX76183 | Canola | cytosol | 25.92 | 28.29 |
| CDY19928 | Canola | cytosol | 24.35 | 27.76 |
| CDX85385 | Canola | cytosol | 23.56 | 26.71 |
| CDX86261 | Canola | cytosol | 23.56 | 26.71 |
| CDX79251 | Canola | plastid | 27.75 | 26.63 |
| CDX68026 | Canola | plastid | 27.49 | 26.45 |
| CDY41199 | Canola | plastid | 24.87 | 26.39 |
| CDY31292 | Canola | cytosol | 24.08 | 26.29 |
| CDX97455 | Canola | plastid | 10.21 | 25.83 |
| CDY14527 | Canola | plastid | 28.01 | 25.66 |
| CDY08834 | Canola | plastid | 28.01 | 25.6 |
| CDY67915 | Canola | cytosol | 16.75 | 25.4 |
| CDX80771 | Canola | cytosol, plastid | 25.39 | 24.01 |
| CDY11199 | Canola | plastid | 25.39 | 23.95 |
| CDY33993 | Canola | plastid | 21.99 | 23.53 |
| CDY23168 | Canola | plastid | 23.3 | 23.36 |
| CDX95305 | Canola | plastid | 23.3 | 23.36 |
| CDY55175 | Canola | cytosol | 27.23 | 22.22 |
| CDY14050 | Canola | cytosol | 26.7 | 21.79 |
| CDX70028 | Canola | cytosol | 22.25 | 21.41 |
| CDY00231 | Canola | cytosol | 26.18 | 20.96 |
| CDX86953 | Canola | cytosol | 26.18 | 20.96 |
| CDY05832 | Canola | cytosol | 26.44 | 20.2 |
| CDX71683 | Canola | cytosol | 26.44 | 20.2 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 21.47 | 19.25 |
| CDY39471 | Canola | cytosol | 17.02 | 16.21 |
Protein Annotations
| EnsemblPlants:CDX75241 | EnsemblPlantsGene:GSBRNA2T00121099001 | Gene3D:1.50.40.10 | GO:A0A078CDP9 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0055085 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PANTHER:PTHR24089 | PANTHER:PTHR24089:SF662 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | ProteinID:CDX75241 |
| ProteinID:CDX75241.1 | SEG:seg | SUPFAM:SSF103506 | UniParc:UPI0004EEE6AA | MapMan:24.2.13 | : |
Description
BnaA01g04610D
Coordinates
chrLK031804:+:260667..262676
Molecular Weight (calculated)
41116.9 Da
IEP (calculated)
9.546
GRAVY (calculated)
0.037
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKTGIQLFD DSRNGLFSVS DLGCDWSLTG VNHHHHTIGA LFASVNQTNP FGSGSIPSNA SLSAQLNGKV EEWEELVNGE KKKKNGGGMK LKIKIGNPSL
101: RRLISGAVAG AVSRTVVAPL ETIRTHLMVG SGGNSSAEVF GDIMKHEGWT GLFRGNLVNV IRVAPARAVE LFVFETVNKK LSPEHGEQSK IPIPASLLAG
201: ACAGVSQTLL TYPLELVKTR LTIQRGVYKG IFDAFVKIIR EEGPTELYRG LAPSLIGVVP YAATNYFAYD SLRKAYRSFS KQEKIGNIET LLIGSLAGAL
301: SSTATFPLEV ARKHMQVGAV SGRVVYKNML DALVSILEHE GILGWYKGLG PSCLKLVPAA GISFMCYEAC KKILVENNNQ EA
101: RRLISGAVAG AVSRTVVAPL ETIRTHLMVG SGGNSSAEVF GDIMKHEGWT GLFRGNLVNV IRVAPARAVE LFVFETVNKK LSPEHGEQSK IPIPASLLAG
201: ACAGVSQTLL TYPLELVKTR LTIQRGVYKG IFDAFVKIIR EEGPTELYRG LAPSLIGVVP YAATNYFAYD SLRKAYRSFS KQEKIGNIET LLIGSLAGAL
301: SSTATFPLEV ARKHMQVGAV SGRVVYKNML DALVSILEHE GILGWYKGLG PSCLKLVPAA GISFMCYEAC KKILVENNNQ EA
001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
Arabidopsis Description
BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.