Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005684.1-P | Field mustard | plastid | 80.93 | 38.86 |
| CDX80771 | Canola | cytosol, plastid | 80.93 | 38.86 |
| CDY11199 | Canola | plastid | 80.93 | 38.77 |
| AT5G01500.1 | Thale cress | cytosol | 78.35 | 36.63 |
| CDY23168 | Canola | plastid | 67.53 | 34.38 |
| CDX95305 | Canola | plastid | 67.53 | 34.38 |
| CDX97455 | Canola | plastid | 19.59 | 25.17 |
| CDX71722 | Canola | cytosol | 32.99 | 18.93 |
| CDY11371 | Canola | cytosol | 32.47 | 18.58 |
| CDY68466 | Canola | cytosol | 31.44 | 18.32 |
| CDX94361 | Canola | cytosol | 31.44 | 18.26 |
| CDX91877 | Canola | cytosol | 32.99 | 18.13 |
| CDX74363 | Canola | cytosol | 32.99 | 18.13 |
| CDY66909 | Canola | cytosol, mitochondrion, plastid | 11.34 | 18.03 |
| CDY07175 | Canola | cytosol | 32.47 | 18.0 |
| CDY48505 | Canola | cytosol | 32.47 | 18.0 |
| CDY18420 | Canola | plastid | 31.96 | 17.97 |
| CDX93344 | Canola | plastid | 31.96 | 17.97 |
| CDY40244 | Canola | plastid | 30.93 | 17.91 |
| CDY01954 | Canola | mitochondrion | 18.04 | 17.77 |
| CDX84024 | Canola | cytosol | 29.9 | 17.63 |
| CDX96850 | Canola | cytosol | 29.9 | 17.52 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 29.38 | 17.43 |
| CDY59491 | Canola | cytosol | 30.41 | 17.35 |
| CDY07764 | Canola | plastid | 30.41 | 17.35 |
| CDY13155 | Canola | cytosol | 30.93 | 17.14 |
| CDX76183 | Canola | cytosol | 30.93 | 17.14 |
| CDY41199 | Canola | plastid | 31.44 | 16.94 |
| CDX82257 | Canola | cytosol | 29.9 | 16.67 |
| CDY36050 | Canola | cytosol, plastid | 29.38 | 16.38 |
| CDY67915 | Canola | cytosol | 21.13 | 16.27 |
| CDY29805 | Canola | cytosol | 28.87 | 16.09 |
| CDY25400 | Canola | cytosol, plastid | 28.87 | 16.09 |
| CDY19928 | Canola | cytosol | 27.32 | 15.82 |
| CDX86261 | Canola | cytosol | 27.32 | 15.73 |
| CDX85385 | Canola | cytosol | 27.32 | 15.73 |
| CDX68841 | Canola | cytosol | 30.41 | 15.65 |
| CDY56673 | Canola | cytosol | 27.32 | 15.63 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 30.41 | 15.45 |
| CDX76755 | Canola | cytosol | 31.44 | 15.37 |
| CDY11524 | Canola | cytosol | 31.44 | 15.33 |
| CDX68026 | Canola | plastid | 28.87 | 14.11 |
| CDX79251 | Canola | plastid | 28.35 | 13.82 |
| CDX68843 | Canola | cytosol | 9.28 | 13.74 |
| CDY14527 | Canola | plastid | 27.84 | 12.95 |
| CDY31292 | Canola | cytosol | 23.2 | 12.86 |
| CDY08834 | Canola | plastid | 27.32 | 12.68 |
| CDY39471 | Canola | cytosol | 21.65 | 10.47 |
| CDY00231 | Canola | cytosol | 25.26 | 10.27 |
| CDX86953 | Canola | cytosol | 25.26 | 10.27 |
| CDY14050 | Canola | cytosol | 24.74 | 10.26 |
| CDY33993 | Canola | plastid | 18.56 | 10.08 |
| CDY55175 | Canola | cytosol | 24.23 | 10.04 |
| CDX70028 | Canola | cytosol | 18.56 | 9.07 |
| CDY05832 | Canola | cytosol | 22.68 | 8.8 |
| CDX71683 | Canola | cytosol | 22.68 | 8.8 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 14.95 | 6.81 |
Protein Annotations
| EnsemblPlants:CDX70930 | EnsemblPlantsGene:GSBRNA2T00140840001 | Gene3D:1.50.40.10 | GO:A0A078C227 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0055085 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PANTHER:PTHR24089 | PANTHER:PTHR24089:SF619 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | ProteinID:CDX70930 |
| ProteinID:CDX70930.1 | SUPFAM:SSF103506 | UniParc:UPI0004EDB9FC | MapMan:24.2.13 | : | : |
Description
BnaC03g10140D
Coordinates
chrLK031791:+:2805982..2807552
Molecular Weight (calculated)
21134.9 Da
IEP (calculated)
9.868
GRAVY (calculated)
0.101
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MDADLGGTHG VRAGQQSAKN AIGFIEAIMI IGREEGVKGY WKGNLPQVIR IVPYSAVQLF AYEAYKAIIL FWGEDGQLSV LGAGACAGMT STLITYPLDV
101: LRLRLAVEPG YRTIASCHML REEGLASLNN GLGPWLLNAI ELKGNPYKSV FDALSVIGLY RGFVPNALKS MPNSSIKLTT FDIVKQRVRR SSKK
101: LRLRLAVEPG YRTIASCHML REEGLASLNN GLGPWLLNAI ELKGNPYKSV FDALSVIGLY RGFVPNALKS MPNSSIKLTT FDIVKQRVRR SSKK
001: MGEEKSLLQF RSFPSLKTSD FALTEEPSWR LENNVSSNRR RGNKRSGGVF TNFASLSVAI RRDRRESTFN GRNGGGGGAF ASVSVVIPKE EDEFAPTSAQ
101: LLKNPIALLS IVPKDAALFF AGAFAGAAAK SVTAPLDRIK LLMQTHGVRA GQQSAKKAIG FIEAITLIGK EEGIKGYWKG NLPQVIRIVP YSAVQLFAYE
201: TYKKLFRGKD GQLSVLGRLG AGACAGMTST LITYPLDVLR LRLAVEPGYR TMSQVALNML REEGVASFYN GLGPSLLSIA PYIAINFCVF DLVKKSLPEK
301: YQQKTQSSLL TAVVAAAIAT GTCYPLDTIR RQMQLKGTPY KSVLDAFSGI IAREGVVGLY RGFVPNALKS MPNSSIKLTT FDIVKKLIAA SEKEIQRIAD
401: DNRKKASPNT IDEQT
101: LLKNPIALLS IVPKDAALFF AGAFAGAAAK SVTAPLDRIK LLMQTHGVRA GQQSAKKAIG FIEAITLIGK EEGIKGYWKG NLPQVIRIVP YSAVQLFAYE
201: TYKKLFRGKD GQLSVLGRLG AGACAGMTST LITYPLDVLR LRLAVEPGYR TMSQVALNML REEGVASFYN GLGPSLLSIA PYIAINFCVF DLVKKSLPEK
301: YQQKTQSSLL TAVVAAAIAT GTCYPLDTIR RQMQLKGTPY KSVLDAFSGI IAREGVVGLY RGFVPNALKS MPNSSIKLTT FDIVKKLIAA SEKEIQRIAD
401: DNRKKASPNT IDEQT
Arabidopsis Description
TAACThylakoid ADP,ATP carrier protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M024]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.