CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11371	Canola	cytosol	98.52	98.23
Bra007623.1-P	Field mustard	cytosol	98.52	98.23
CDY01954	Canola	mitochondrion	49.41	84.77
KRH68888	Soybean	cytosol	85.5	83.77
KRG97138	Soybean	cytosol	84.91	83.19
CDY07175	Canola	cytosol	85.5	82.57
CDY48505	Canola	cytosol	85.5	82.57
KRH47947	Soybean	mitochondrion	86.69	82.54
VIT_15s0046g01290.t01	Wine grape	cytosol	86.39	82.49
CDX74363	Canola	cytosol	86.09	82.44
CDX91877	Canola	cytosol	86.09	82.44
KRH06509	Soybean	cytosol	85.5	81.41
Solyc01g095570.2.1	Tomato	cytosol	84.91	80.85
Solyc10g011670.2.1	Tomato	cytosol	84.62	80.56
PGSC0003DMT400049872	Potato	cytosol	84.32	80.28
PGSC0003DMT400000597	Potato	cytosol	84.32	80.28
GSMUA_Achr7P24620_001	Banana	cytosol	83.43	78.99
EES20024	Sorghum	cytosol	82.54	78.59
GSMUA_Achr3P32000_001	Banana	cytosol	82.25	77.87
HORVU1Hr1G092860.1	Barley	cytosol	80.77	77.12
TraesCS1A01G425000.1	Wheat	cytosol	80.18	76.55
TraesCS1B01G459400.1	Wheat	cytosol	80.18	76.55
TraesCS1D01G434000.1	Wheat	cytosol	80.18	76.55
GSMUA_Achr2P06340_001	Banana	cytosol	81.07	76.54
Os05t0585900-01	Rice	cytosol, mitochondrion	80.18	76.34
CDY66909	Canola	cytosol, mitochondrion, plastid	27.51	76.23
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	59.17	70.42
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	29.29	64.71
CDX84024	Canola	cytosol	36.39	37.39
CDX96850	Canola	cytosol	36.39	37.16
CDX94361	Canola	cytosol	36.09	36.53
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	35.21	36.39
CDY68466	Canola	cytosol	35.5	36.04
CDX68843	Canola	cytosol	13.61	35.11
CDY07764	Canola	plastid	34.02	33.82
CDY59491	Canola	cytosol	33.73	33.53
CDX70930	Canola	cytosol	18.93	32.99
CDY40244	Canola	plastid	31.66	31.94
CDX93344	Canola	plastid	32.54	31.88
CDY18420	Canola	plastid	32.54	31.88
CDX86261	Canola	cytosol	31.36	31.45
CDX85385	Canola	cytosol	31.36	31.45
CDY67915	Canola	cytosol	23.37	31.35
CDY19928	Canola	cytosol	30.77	31.04
CDY56673	Canola	cytosol	30.77	30.68
CDY13155	Canola	cytosol	31.07	30.0
CDY41199	Canola	plastid	31.66	29.72
CDX76183	Canola	cytosol	30.77	29.71
CDX68841	Canola	cytosol	32.84	29.44
CDX75241	Canola	cytoskeleton, cytosol, nucleus	32.54	28.8
CDX76755	Canola	cytosol	32.25	27.46
CDY11524	Canola	cytosol	32.25	27.39
CDX70028	Canola	cytosol	30.18	25.69
CDY11199	Canola	plastid	30.77	25.68
CDX80771	Canola	cytosol, plastid	30.47	25.5
CDY55175	Canola	cytosol	34.91	25.21
CDY23168	Canola	plastid	28.4	25.2
CDX97455	Canola	plastid	11.24	25.17
CDY14050	Canola	cytosol	34.62	25.0
CDX95305	Canola	plastid	28.11	24.93
CDY00231	Canola	cytosol	34.91	24.74
CDX68026	Canola	plastid	28.99	24.69
CDX71683	Canola	cytosol	36.39	24.6
CDY05832	Canola	cytosol	36.09	24.4
CDX79251	Canola	plastid	28.7	24.37
CDX86953	Canola	cytosol	34.32	24.32
CDX82257	Canola	cytosol	24.85	24.14
CDY36050	Canola	cytosol, plastid	24.56	23.85
CDY25400	Canola	cytosol, plastid	24.56	23.85
CDY29805	Canola	cytosol	24.56	23.85
CDY14527	Canola	plastid	27.51	22.3
CDY08834	Canola	plastid	27.51	22.25
CDY31292	Canola	cytosol	22.78	22.0
CDX98981	Canola	endoplasmic reticulum, golgi	26.92	21.36
CDY33993	Canola	plastid	22.19	21.01
CDY39471	Canola	cytosol	18.34	15.46

Protein Annotations

EnsemblPlants:CDX71722	EnsemblPlantsGene:GSBRNA2T00155413001	Gene3D:1.50.40.10	GO:A0A078C4A2	GO:GO:0006810	GO:GO:0008150
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
ncoils:Coil	PANTHER:PTHR24089	PANTHER:PTHR24089:SF648	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926
ProteinID:CDX71722	ProteinID:CDX71722.1	SUPFAM:SSF103506	UniParc:UPI0004EBFA03	MapMan:24.2.13	:

Description

BnaC08g31520D

Coordinates

chrLK031795:+:139922..142105

Molecular Weight (calculated)

36602.6 Da

IEP (calculated)

10.165

GRAVY (calculated)

-0.002

Length

338 amino acids

Sequence
(BLAST)

001: MASEDAKRSE GVKAPSNAVI GICKSLIAGG VAGGVSRTAV APLERLKILL QVQNPHSIKY NGTVQGLKYI WRTEGFRGLF KGNGANCARI VPNSAVKFFS
101: YEQASKGILY LYRQQTGNDD AQLTPLLRLG AGACAGIIAM SATYPMDMVR GRLTVQTDKS PYQYRGMVHA LSTVLRQEGP RALYRGWLPS VIGVVPYVGL
201: NFAVYESLKD WLVKSKPFGI IDNNNSELTV TTRLACGAIA GTMGQTVAYP LDVVRRRMQM VGWKDASSVI TGDGRGKAPI EYSGMVDAFK KTVRHEGVGA
301: LYKGLVPNSV KVVPSIAIAF VTYEKVKDIL GVEFRISD

Best Arabidopsis Sequence Match ( AT4G01100.1 )
(BLAST)

001: MASEDVKRTE SAAVSTIVNL AEEAREGVKA PSYAFKSICK SLFAGGVAGG VSRTAVAPLE RMKILLQVQN PHNIKYSGTV QGLKHIWRTE GLRGLFKGNG
101: TNCARIVPNS AVKFFSYEQA SNGILYMYRQ RTGNENAQLT PLLRLGAGAT AGIIAMSATY PMDMVRGRLT VQTANSPYQY RGIAHALATV LREEGPRALY
201: RGWLPSVIGV VPYVGLNFSV YESLKDWLVK ENPYGLVENN ELTVVTRLTC GAIAGTVGQT IAYPLDVIRR RMQMVGWKDA SAIVTGEGRS TASLEYTGMV
301: DAFRKTVRHE GFGALYKGLV PNSVKVVPSI AIAFVTYEMV KDVLGVEFRI SD

Arabidopsis Description

ADNT1Adenine nucleotide transporter 1 [Source:UniProtKB/TrEMBL;Acc:F4JHS4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.