CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0585900-01	Rice	cytosol, mitochondrion	92.39	92.39
TraesCS1D01G434000.1	Wheat	cytosol	91.83	92.09
HORVU1Hr1G092860.1	Barley	cytosol	91.83	92.09
TraesCS1A01G425000.1	Wheat	cytosol	91.83	92.09
TraesCS1B01G459400.1	Wheat	cytosol	91.55	91.81
CDY66909	Canola	cytosol, mitochondrion, plastid	30.14	87.7
GSMUA_Achr7P24620_001	Banana	cytosol	87.04	86.55
GSMUA_Achr2P06340_001	Banana	cytosol	86.76	86.03
GSMUA_Achr3P32000_001	Banana	cytosol	86.2	85.71
KRH68888	Soybean	cytosol	83.1	85.51
KRH06509	Soybean	cytosol	85.35	85.35
KRH47947	Soybean	mitochondrion	85.07	85.07
KRG97138	Soybean	cytosol	82.54	84.93
CDX91877	Canola	cytosol	83.66	84.14
Solyc08g082020.2.1	Tomato	cytosol	84.51	84.03
CDX74363	Canola	cytosol	83.38	83.85
Bra000944.1-P	Field mustard	cytosol	83.1	83.57
CDY07175	Canola	cytosol	82.25	83.43
CDY48505	Canola	cytosol	82.25	83.43
Bra037383.1-P	Field mustard	cytosol	82.25	83.43
CDY11371	Canola	cytosol	79.44	83.19
VIT_15s0046g01290.t01	Wine grape	cytosol	82.82	83.05
Bra007623.1-P	Field mustard	cytosol	79.15	82.89
VIT_02s0025g01180.t01	Wine grape	cytosol	82.54	82.77
CDX71722	Canola	cytosol	78.59	82.54
PGSC0003DMT400049872	Potato	cytosol	82.54	82.54
Solyc10g011670.2.1	Tomato	cytosol	82.54	82.54
Solyc01g095570.2.1	Tomato	cytosol	81.41	81.41
KRH77631	Soybean	cytosol	75.21	80.91
PGSC0003DMT400000597	Potato	cytosol	80.85	80.85
CDY01954	Canola	mitochondrion	44.79	80.71
KRH27854	Soybean	cytosol	74.08	79.7
AT4G01100.2	Thale cress	cytosol	81.69	79.23
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	34.08	79.08
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	59.72	74.65
EES00940	Sorghum	plastid	34.08	35.59
KXG29836	Sorghum	cytosol, mitochondrion, plastid	32.68	34.52
EES01355	Sorghum	extracellular	32.39	34.23
EES00336	Sorghum	cytosol	29.58	31.82
OQU92863	Sorghum	cytosol	30.7	31.5
KXG34072	Sorghum	cytosol	28.73	29.74
OQU92679	Sorghum	cytosol	9.3	26.61
EES02734	Sorghum	mitochondrion	28.73	25.5
EES17800	Sorghum	cytosol	29.86	25.3
KXG29744	Sorghum	plastid	36.9	24.81
EES04720	Sorghum	plastid	30.14	24.6
EER90006	Sorghum	plastid	28.73	24.23
KXG39987	Sorghum	peroxisome	29.01	24.01
EER88619	Sorghum	cytosol, plastid	34.65	23.75
EER97679	Sorghum	cytosol	23.66	22.89
EER96987	Sorghum	cytosol	22.82	21.6
EES15354	Sorghum	cytosol	21.69	20.16

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8064757	UniProt:C5YWK0	EnsemblPlants:EES20024	ProteinID:EES20024
ProteinID:EES20024.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005347	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0005773	GO:GO:0005774
GO:GO:0006091	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0008152	GO:GO:0009060
GO:GO:0009536	GO:GO:0009987	GO:GO:0015217	GO:GO:0015866	GO:GO:0015867	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:0080121	GO:GO:0080122	InterPro:IPR018108
InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF648	EnsemblPlantsGene:SORBI_3009G249500	SUPFAM:SSF103506	unigene:Sbi.3627
UniParc:UPI0001A893BB	RefSeq:XP_002441594.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:58461666..58466785

Molecular Weight (calculated)

38579.9 Da

IEP (calculated)

9.762

GRAVY (calculated)

0.020

Length

355 amino acids

Sequence
(BLAST)

001: MASEDVVGKS RGDTAVTTIV NLAEEAKLAR EGVKAPGHQI LTICKSLVAG GVAGGVSRTA VAPLERLKIL LQVQNPHSIK YNGTVQGLKY IWRTEGLRGL
101: FKGNGTNCAR IVPNSAVKFF SYEQAAKGIL WAYRQQTGEE DAQLTPLLRL GAGACAGIIA MSATYPMDMV RGRITVQTDK SPYQYRGMFH ALGTVYREEG
201: FRALYRGWLP SVIGVVPYVG LNFAVYESLK DWLLQTNPFG LANDNELHVV TRLGCGAVAG TIGQTVAYPL DVIRRRMQMV GWNHADSIIT GKGKEALQYN
301: GMIDAFRKTV RHEGAGALYK GLVPNSVKVV PSIAIAFVTY EVVKDVLGVE MRISD

Best Arabidopsis Sequence Match ( AT4G01100.1 )
(BLAST)

001: MASEDVKRTE SAAVSTIVNL AEEAREGVKA PSYAFKSICK SLFAGGVAGG VSRTAVAPLE RMKILLQVQN PHNIKYSGTV QGLKHIWRTE GLRGLFKGNG
101: TNCARIVPNS AVKFFSYEQA SNGILYMYRQ RTGNENAQLT PLLRLGAGAT AGIIAMSATY PMDMVRGRLT VQTANSPYQY RGIAHALATV LREEGPRALY
201: RGWLPSVIGV VPYVGLNFSV YESLKDWLVK ENPYGLVENN ELTVVTRLTC GAIAGTVGQT IAYPLDVIRR RMQMVGWKDA SAIVTGEGRS TASLEYTGMV
301: DAFRKTVRHE GFGALYKGLV PNSVKVVPSI AIAFVTYEMV KDVLGVEFRI SD

Arabidopsis Description

ADNT1Adenine nucleotide transporter 1 [Source:UniProtKB/TrEMBL;Acc:F4JHS4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.