CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053640_P001	Maize	plasma membrane	93.56	93.38
EER88619	Sorghum	cytosol, plastid	79.92	81.47
PGSC0003DMT400074454	Potato	plastid	26.33	77.65
Os02t0201500-00	Rice	plastid	84.66	77.07
GSMUA_AchrUn_...	Banana	cytosol	72.35	74.32
KRH63894	Soybean	cytosol	65.53	73.93
KRH41046	Soybean	cytosol	68.75	73.78
KRH59718	Soybean	cytosol	69.13	73.0
VIT_14s0068g00890.t01	Wine grape	cytosol	67.42	72.8
KRH54061	Soybean	cytosol	65.34	72.48
GSMUA_Achr8P26070_001	Banana	cytosol	70.27	72.04
GSMUA_Achr5P05990_001	Banana	cytosol	69.89	71.79
KRG94737	Soybean	cytosol	64.58	71.49
KRH70079	Soybean	cytosol	65.15	71.22
KRH06795	Soybean	cytosol	63.64	71.04
CDY14050	Canola	cytosol	62.5	70.51
PGSC0003DMT400036927	Potato	cytosol	65.15	70.35
CDX70028	Canola	cytosol	52.84	70.28
AT5G07320.1	Thale cress	cytosol	63.64	70.15
CDY55175	Canola	cytosol	62.12	70.09
Bra028702.1-P	Field mustard	cytosol	62.12	70.09
Solyc06g068720.2.1	Tomato	cytosol	66.29	70.0
Bra009271.1-P	Field mustard	cytosol	56.06	68.68
Solyc03g118090.2.1	Tomato	cytosol	65.15	68.53
AT5G51050.1	Thale cress	cytosol	64.58	68.47
Bra035722.1-P	Field mustard	cytosol	64.2	67.94
CDY05832	Canola	cytosol	64.2	67.8
CDX71683	Canola	cytosol	63.83	67.4
CDY00231	Canola	cytosol	60.04	66.46
AT5G61810.1	Thale cress	cytosol	60.04	66.32
Bra019615.1-P	Field mustard	cytosol	59.85	66.25
CDX86953	Canola	cytosol	59.85	66.25
VIT_17s0000g00030.t01	Wine grape	plastid	68.37	65.88
CDX98981	Canola	endoplasmic reticulum, golgi	51.14	63.38
EES20024	Sorghum	cytosol	24.81	36.9
EES00336	Sorghum	cytosol	21.02	33.64
OQU92863	Sorghum	cytosol	21.78	33.24
EES01355	Sorghum	extracellular	18.94	29.76
KXG29836	Sorghum	cytosol, mitochondrion, plastid	18.75	29.46
EES00940	Sorghum	plastid	18.56	28.82
OQU92679	Sorghum	cytosol	6.63	28.23
EES17800	Sorghum	cytosol	21.21	26.73
KXG34072	Sorghum	cytosol	17.05	26.24
EER90006	Sorghum	plastid	20.45	25.65
EES04720	Sorghum	plastid	20.45	24.83
EES02734	Sorghum	mitochondrion	18.18	24.0
EER97679	Sorghum	cytosol	16.48	23.71
KXG39987	Sorghum	peroxisome	19.13	23.54
EER96987	Sorghum	cytosol	16.1	22.67
EES15354	Sorghum	cytosol	16.29	22.51

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8082921	UniProt:C5XXL4	ProteinID:EES06478.1
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005347
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0015217
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR002048
InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KXG29744	ProteinID:KXG29744	ProteinID:KXG29744.1	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	ProteinID:OQU84589.1	PFAM:PF00153	PFAM:PF13499	PFAM:PF13833
PRINTS:PR00926	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF454
SMART:SM00054	EnsemblPlantsGene:SORBI_3004G084200	SUPFAM:SSF103506	SUPFAM:SSF47473	unigene:Sbi.21568	UniParc:UPI0001A85CBC
RefSeq:XP_002453502.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:6986419..6993240

Molecular Weight (calculated)

57194.7 Da

IEP (calculated)

6.447

GRAVY (calculated)

-0.084

Length

528 amino acids

Sequence
(BLAST)

001: MSGAAVQAVE PRPAAAATTT TAASPAATAQ PAAAARGAIG CGGAARASGP AAATMEHVLL ALRETEAERE ARIRGVFGFF DAAGRGHLDH AQIVAGLVAL
101: RVPEGTAGGA GAEDYARALL RACDRDRVGR VGYDDFRRYM DDKELELYRI FQAIDVEHNG CILPEELWHA LVKAGIEIDD EELARFVEHV DKDNDGIITF
201: EEWRDFLLLY PHEATIENIY HHWERVCLVD IGEQAAIPEG ISKHVSASKY LIAGGIAGAA SRTATAPLDR LKVNMQVQTN RTTVLDAVKG IWREGGLLGF
301: FRGNGLNVVK VAPESAIRFY TYEMLKEYIM KSKGENKSDI GTSGRLMAGG LAGAIAQTAI YPIDLVKTRL QTYEGGKIPS LGALSRDIWI HEGPRAFYRG
401: LVPSLLGMVP YAGIDLTVYE TLKEMSKTYV LKDNDPGPLV QLGCGTVSGA LGATCVYPLQ VIRTRMQAQP ANSEDPYRGM TDCFRRTLQR EGVSGFYKGL
501: VPNLLKVVPA ASITYLVYET MKKSLSLD

Best Arabidopsis Sequence Match ( AT5G51050.1 )
(BLAST)

001: MSTTHVGLPT KMEATKSSKQ NCCNPVKKPG PVSIDHVLLA LRETREERDL RIRSLFSFFD SENVGYLDCA QIEKGLCALQ IPSGYKYAKE LFRVCDANRD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT5G51050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.