Factsheet for GSMUA_AchrUn_randomP03960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26070_001	Banana	cytosol	93.39	93.2
GSMUA_Achr5P05990_001	Banana	cytosol	88.13	88.13
VIT_14s0068g00890.t01	Wine grape	cytosol	79.57	83.64
PGSC0003DMT400074454	Potato	plastid	28.02	80.45
KRH41046	Soybean	cytosol	75.88	79.27
KRH59718	Soybean	cytosol	77.04	79.2
KRG94737	Soybean	cytosol	73.35	79.04
KRH06795	Soybean	cytosol	72.37	78.65
KRH63894	Soybean	cytosol	71.21	78.21
KRH54061	Soybean	cytosol	71.98	77.73
Solyc06g068720.2.1	Tomato	cytosol	75.29	77.4
CDY14050	Canola	cytosol	70.43	77.35
VIT_17s0000g00030.t01	Wine grape	plastid	81.91	76.82
CDY55175	Canola	cytosol	69.84	76.71
Bra028702.1-P	Field mustard	cytosol	69.84	76.71
PGSC0003DMT400036927	Potato	cytosol	72.96	76.69
EER88619	Sorghum	cytosol, plastid	77.04	76.45
AT5G51050.1	Thale cress	cytosol	73.93	76.31
Os06t0604500-01	Rice	nucleus	75.68	75.53
Solyc03g118090.2.1	Tomato	cytosol	73.54	75.3
KRH70079	Soybean	cytosol	70.62	75.16
TraesCS7B01G278000.1	Wheat	cytosol, plastid	75.29	75.15
TraesCS7A01G376600.1	Wheat	cytosol, plastid	75.68	74.81
TraesCS7D01G372900.1	Wheat	cytosol, plastid	75.49	74.76
AT5G07320.1	Thale cress	cytosol	69.46	74.53
CDX71683	Canola	cytosol	72.37	74.4
Bra035722.1-P	Field mustard	cytosol	72.18	74.35
CDX70028	Canola	cytosol	57.39	74.31
CDY05832	Canola	cytosol	72.18	74.2
HORVU7Hr1G090020.9	Barley	mitochondrion	75.29	74.0
Bra009271.1-P	Field mustard	cytosol	61.48	73.32
AT5G61810.1	Thale cress	cytosol	67.32	72.38
KXG29744	Sorghum	plastid	74.32	72.35
CDY00231	Canola	cytosol	66.54	71.7
Bra019615.1-P	Field mustard	cytosol	66.54	71.7
Zm00001d053640_P001	Maize	plasma membrane	73.74	71.64
CDX86953	Canola	cytosol	66.34	71.49
Zm00001d046509_P002	Maize	plastid	76.46	71.2
CDX98981	Canola	endoplasmic reticulum, golgi	57.0	68.78
Os02t0201500-00	Rice	plastid	75.49	66.9
GSMUA_Achr2P06340_001	Banana	cytosol	25.49	36.59
GSMUA_Achr3P32000_001	Banana	cytosol	24.71	35.57
GSMUA_Achr7P24620_001	Banana	cytosol	24.51	35.29
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	10.12	33.99
GSMUA_Achr8P02430_001	Banana	cytosol	22.96	33.62
GSMUA_Achr10P...	Banana	cytosol	20.43	31.16
GSMUA_Achr11P...	Banana	extracellular	6.03	30.69
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	16.54	29.93
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	19.26	29.29
GSMUA_Achr6P33950_001	Banana	plastid	22.57	29.0
GSMUA_Achr8P22520_001	Banana	cytosol	18.29	28.4
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	16.34	28.19
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	21.6	27.61
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	15.95	27.61
GSMUA_Achr7P10070_001	Banana	cytosol	20.62	27.46
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	8.17	27.45
GSMUA_Achr10P...	Banana	cytosol	18.29	27.09
GSMUA_Achr7P10000_001	Banana	mitochondrion	11.67	25.75
GSMUA_Achr7P09310_001	Banana	cytosol	17.32	25.72
GSMUA_Achr10P...	Banana	mitochondrion	6.42	24.63
GSMUA_Achr2P14780_001	Banana	mitochondrion	16.54	24.57
GSMUA_Achr9P03630_001	Banana	mitochondrion	17.9	24.4
GSMUA_Achr10P...	Banana	cytosol	17.32	22.88
GSMUA_Achr6P03740_001	Banana	cytosol	15.76	22.38
GSMUA_Achr10P...	Banana	endoplasmic reticulum	19.46	22.37
GSMUA_Achr6P30940_001	Banana	cytosol	15.37	22.01
GSMUA_Achr11P...	Banana	cytosol	4.67	19.05

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.50.40.10	MapMan:24.2.13	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_AchrUn_randomG03960_001	EnsemblPlants:GSMUA_AchrUn_randomP03960_001	EnsemblPlants:GSMUA_AchrUn_randomT03960_001
InterPro:IPR002048	InterPro:IPR018108	InterPro:IPR023395	UniProt:M0U658	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFAM:PF13202	PFAM:PF13499	PRINTS:PR00926	ScanProsite:PS00018
PFscan:PS50222	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF454	SMART:SM00054	SUPFAM:SSF103506
SUPFAM:SSF47473	UniParc:UPI000294E232	:	:	:	:

Description

Putative Calcium-binding mitochondrial carrier protein SCaMC-1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG03960_001]

Coordinates

chrchrUn_random:+:17663419..17666870

Molecular Weight (calculated)

57171.7 Da

IEP (calculated)

6.092

GRAVY (calculated)

-0.166

Length

514 amino acids

Sequence
(BLAST)

001: MSGAAKAVEH RIGFPTKMEA TAPAADGEQQ RRPGGCNPVK KPGPVSMDHV LLALRETKEE REVRIRSLFN FFDAAGVGQL DYAQIEAGLS ALRIPTEYKY
101: ARDLLKVCDA NRDGRVDYQE FRRYMDDKEL ELYRIFQAID VEHNGCILPE ELWDALIKAG IEIDDEELAR FVEHVDKDNN GIITFEEWRD FLLLYPHEAT
201: IENIYQYWER VCLVDIGEQA AIPEGISKHV NASQYLIAGG VAGAASRTAT APLDRLKVVL QVQTTQARIV PAIKDIWREG HFLGFFRGNG LNVMKVAPES
301: AIKFYTFEML KDFIVKTKGE EKSDIGASGR LTAGGLAGAV AQTAIYPLDL VKTRLQTYAC EGGKVPNLTT LTKDIWVHEG PRAFYRGLVP SLLGIIPYAG
401: IDLTAYETLK DMSRTYILKD SEPGPLVQLG CGTISGALGA TCVYPLQVIR TRMQAHTNSS TAYNGMSDVF WKTLRNEGFS GFYKGIFPNL LKVVPSASIT
501: YLVYETMKKS LTLD

Best Arabidopsis Sequence Match ( AT5G51050.1 )
(BLAST)

001: MSTTHVGLPT KMEATKSSKQ NCCNPVKKPG PVSIDHVLLA LRETREERDL RIRSLFSFFD SENVGYLDCA QIEKGLCALQ IPSGYKYAKE LFRVCDANRD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT5G51050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.