Factsheet for GSMUA_Achr6P33950_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P02430_001	Banana	cytosol	76.75	87.46
GSMUA_Achr10P...	Banana	cytosol	66.25	78.64
OQU92863	Sorghum	cytosol	67.0	77.46
Zm00001d047838_P001	Maize	cytosol	66.0	76.97
Os03t0267700-01	Rice	cytosol	66.25	76.59
HORVU4Hr1G060540.1	Barley	cytosol	64.5	75.44
TraesCS4B01G211000.1	Wheat	plastid	62.5	74.63
TraesCS4A01G093400.1	Wheat	cytosol	63.75	74.56
TraesCS4D01G211700.2	Wheat	cytosol	63.75	74.34
KRH15037	Soybean	cytosol	60.5	74.23
KRH73096	Soybean	cytosol	60.25	73.7
OQU92679	Sorghum	cytosol	22.75	73.39
VIT_08s0007g01280.t01	Wine grape	cytosol	61.25	72.92
KRH49196	Soybean	endoplasmic reticulum	48.5	70.55
VIT_13s0019g02440.t01	Wine grape	cytosol	63.5	70.36
KRH00061	Soybean	cytosol	58.25	70.18
PGSC0003DMT400062351	Potato	cytosol	60.0	68.18
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	56.75	68.17
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	59.75	67.32
AT3G55640.4	Thale cress	plastid	55.25	66.57
CDY40244	Canola	plastid	54.5	65.07
Bra000026.1-P	Field mustard	plastid	52.25	61.47
CDY07764	Canola	plastid	52.25	61.47
CDY41199	Canola	plastid	55.25	61.39
Bra007181.1-P	Field mustard	plastid	54.5	61.24
CDX93344	Canola	plastid	52.75	61.16
CDY18420	Canola	plastid	52.75	61.16
Bra017151.1-P	Field mustard	plastid	52.5	60.87
CDY59491	Canola	cytosol	51.5	60.59
CDY13155	Canola	cytosol	53.0	60.57
CDX76183	Canola	cytosol	52.75	60.29
AT3G53940.1	Thale cress	cytosol	54.5	59.73
Bra014855.1-P	Field mustard	cytosol	52.75	58.94
AT2G37890.1	Thale cress	cytosol	47.0	55.79
GSMUA_Achr10P...	Banana	cytosol	27.25	31.41
GSMUA_Achr7P24620_001	Banana	cytosol	27.5	30.81
GSMUA_Achr3P32000_001	Banana	cytosol	27.25	30.53
GSMUA_Achr2P06340_001	Banana	cytosol	27.25	30.45
GSMUA_Achr11P...	Banana	extracellular	7.5	29.7
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	25.0	29.59
GSMUA_Achr7P09310_001	Banana	cytosol	25.5	29.48
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	20.0	28.17
GSMUA_Achr8P22520_001	Banana	cytosol	21.75	26.28
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	19.25	25.93
GSMUA_Achr9P03630_001	Banana	mitochondrion	24.25	25.73
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	19.0	25.5
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	9.75	25.49
GSMUA_Achr7P10070_001	Banana	cytosol	24.0	24.87
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	24.75	24.63
GSMUA_Achr6P03740_001	Banana	cytosol	22.25	24.59
GSMUA_Achr7P10000_001	Banana	mitochondrion	14.25	24.46
GSMUA_Achr6P30940_001	Banana	cytosol	21.0	23.4
GSMUA_Achr10P...	Banana	mitochondrion	7.75	23.13
GSMUA_AchrUn_...	Banana	cytosol	29.0	22.57
GSMUA_Achr10P...	Banana	cytosol	21.75	22.36
GSMUA_Achr2P14780_001	Banana	mitochondrion	19.25	22.25
GSMUA_Achr8P26070_001	Banana	cytosol	28.5	22.14
GSMUA_Achr10P...	Banana	endoplasmic reticulum	24.25	21.7
GSMUA_Achr5P05990_001	Banana	cytosol	27.75	21.6
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	8.25	21.57
GSMUA_Achr11P...	Banana	cytosol	6.5	20.63

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr6G33950_001	EnsemblPlants:GSMUA_Achr6P33950_001	EnsemblPlants:GSMUA_Achr6T33950_001	InterPro:IPR018108
InterPro:IPR023395	UniProt:M0TCI8	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	SUPFAM:SSF103506	UniParc:UPI0002948205
SEG:seg	:	:	:	:	:

Description

Putative Mitochondrial substrate carrier family protein B [Source:GMGC_GENE;Acc:GSMUA_Achr6G33950_001]

Coordinates

chr6:+:32844375..32849553

Molecular Weight (calculated)

43697.9 Da

IEP (calculated)

10.150

GRAVY (calculated)

-0.006

Length

400 amino acids

Sequence
(BLAST)

001: MQTEARVGVV VEGGGHRALS SGHAGGAGAL DGGARSYSSH HPQQQQQQLQ HQPQIGTVAH LISGGVAGAV SKTCTAPLAR LTILFQRIWS QFTKVQGMHS
101: DVATLRKASI WHEASRVVHE EGFRAFWRGN LVTIAHRLPY SSISFYAYER YKNFLQLVPG LDKHRDSVSA DVCVRLFGGG LAGITAASMT YPLDLVRTRL
201: AAQTNTMYYR GISHALYAIC RDEGIRGLYK GLGATLLGVG PNIAISYSVY ETLRSHWQVE RPYDSPVLVS LACGSLSGVA SSTVTFPLDL VRRRKQLEGA
301: AGRACVYKSG IFGTLRHIIR TEGFRGLYRG IMPEYYKVVP GVGIVFMTYE TLKSIMAGMS SNYLLSVFSR NKIFNPCSIL VGLGGRNLPS FSWCASRCRP

Best Arabidopsis Sequence Match ( AT3G55640.4 )
(BLAST)

001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL

Arabidopsis Description

Ca-dependent solute carrier-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M058]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.