Factsheet for Bra007181.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40244	Canola	plastid	94.1	100.0
CDY41199	Canola	plastid	95.79	94.72
AT3G55640.4	Thale cress	plastid	85.96	92.17
KRH73096	Soybean	cytosol	66.01	71.87
KRH15037	Soybean	cytosol	65.45	71.47
VIT_13s0019g02440.t01	Wine grape	cytosol	65.73	64.82
Bra000026.1-P	Field mustard	plastid	60.11	62.94
Os01t0143100-01	Rice	mitochondrion	56.46	62.42
GSMUA_Achr8P02430_001	Banana	cytosol	61.52	62.39
Zm00001d047838_P001	Maize	cytosol	60.11	62.39
OQU92863	Sorghum	cytosol	60.39	62.14
TraesCS4B01G211000.1	Wheat	plastid	58.43	62.09
HORVU4Hr1G060540.1	Barley	cytosol	59.55	61.99
TraesCS4D01G211700.2	Wheat	cytosol	59.55	61.81
GSMUA_Achr10P...	Banana	cytosol	58.43	61.72
TraesCS4A01G093400.1	Wheat	cytosol	59.27	61.7
Os03t0267700-01	Rice	cytosol	59.83	61.56
Zm00001d039884_P002	Maize	cytosol	56.46	61.28
Bra017151.1-P	Field mustard	plastid	59.27	61.16
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	55.9	60.49
EES00336	Sorghum	cytosol	55.9	60.3
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	55.62	60.18
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	55.62	60.18
Bra014855.1-P	Field mustard	cytosol	60.11	59.78
OQU92679	Sorghum	cytosol	19.1	54.84
GSMUA_Achr6P33950_001	Banana	plastid	61.24	54.5
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	55.9	53.49
Bra007623.1-P	Field mustard	cytosol	29.49	30.97
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	28.37	30.89
Bra016697.1-P	Field mustard	cytosol	28.37	30.51
Bra026457.1-P	Field mustard	cytosol	28.09	29.94
Bra037383.1-P	Field mustard	cytosol	28.93	29.43
Bra000944.1-P	Field mustard	cytosol	28.37	28.61
Bra031891.1-P	Field mustard	cytosol	21.63	28.52
Bra036153.1-P	Field mustard	cytosol	25.56	27.16
Bra011344.1-P	Field mustard	cytosol	27.25	25.39
Bra033473.1-P	Field mustard	plastid	26.97	25.2
Bra007793.1-P	Field mustard	cytosol	28.09	25.13
Bra005684.1-P	Field mustard	plastid	25.84	22.77
Bra035801.1-P	Field mustard	cytosol	22.19	22.7
Bra024342.1-P	Field mustard	plastid	26.12	22.25
Bra003653.1-P	Field mustard	plastid	24.72	22.17
Bra019615.1-P	Field mustard	cytosol	29.21	21.8
Bra028702.1-P	Field mustard	cytosol	28.37	21.58
Bra035722.1-P	Field mustard	cytosol	30.06	21.44
Bra009271.1-P	Field mustard	cytosol	25.56	21.11
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	17.98	20.85
Bra001780.1-P	Field mustard	cytosol	16.01	20.73

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra007181	EnsemblPlants:Bra007181.1	EnsemblPlants:Bra007181.1-P	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:M4CSI9	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF403
SUPFAM:SSF103506	UniParc:UPI0002542A9D	SEG:seg	:	:	:

Description

AT3G55640 (E=2e-125) | mitochondrial substrate carrier family protein

Coordinates

chrA09:+:27789030..27790941

Molecular Weight (calculated)

38811.1 Da

IEP (calculated)

10.124

GRAVY (calculated)

0.055

Length

356 amino acids

Sequence
(BLAST)

001: MVMRTEARVS VSSGQSVVGN KASSHRLTQD QRSHIESASQ LLAGGIAGAF SKTCTAPLSR LTILFQVQGM HTNAAALKKP SILHEASRIL NEEGLKAFWK
101: GNLVTIAHRL PYSSVNFYTY EHYKKFLYMV TGMENHRESI SSNVFVHFVA GGLAGITAAS ATYPLDLVRT RLAAQTKVIY YTGIWNTLRT ISTDEGILGL
201: YKGLGTTLVG VGPSIAISFS AYESLRSYWM SNRPHDSPVV VSLACGSLSG IASSTVSQLL DQTPCVSSSD VKNKTAATFP LDLVRRRKQL EGIGGRAVVY
301: KTGLLGTLKR IVKTEGVRGL YRGILPEYYK VVPGVGICFM TYETLKLYFM DLSSKL

Best Arabidopsis Sequence Match ( AT3G55640.4 )
(BLAST)

001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL

Arabidopsis Description

Ca-dependent solute carrier-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M058]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.