Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G058400.1 | Wheat | cytosol, mitochondrion, peroxisome | 99.09 | 99.09 |
| TraesCS3A01G058200.1 | Wheat | cytosol, mitochondrion, peroxisome | 99.09 | 99.09 |
| HORVU3Hr1G011350.16 | Barley | mitochondrion, plastid | 97.87 | 86.56 |
| Os01t0143100-01 | Rice | mitochondrion | 84.19 | 86.02 |
| EES00336 | Sorghum | cytosol | 82.98 | 82.73 |
| Zm00001d039884_P002 | Maize | cytosol | 82.37 | 82.62 |
| KRH73096 | Soybean | cytosol | 63.83 | 64.22 |
| KRH15037 | Soybean | cytosol | 61.7 | 62.27 |
| KRH49196 | Soybean | endoplasmic reticulum | 51.37 | 61.45 |
| KRH00061 | Soybean | cytosol | 61.7 | 61.14 |
| VIT_08s0007g01280.t01 | Wine grape | cytosol | 62.31 | 61.01 |
| TraesCS4B01G211000.1 | Wheat | plastid | 62.01 | 60.9 |
| AT3G55640.4 | Thale cress | plastid | 61.09 | 60.54 |
| KRH65929 | Soybean | cytosol, mitochondrion, peroxisome | 60.79 | 60.06 |
| CDY40244 | Canola | plastid | 60.49 | 59.4 |
| PGSC0003DMT400062351 | Potato | cytosol | 62.61 | 58.52 |
| VIT_13s0019g02440.t01 | Wine grape | cytosol | 64.13 | 58.45 |
| Solyc09g011360.2.1 | Tomato | cytosol, peroxisome, plastid | 62.61 | 58.03 |
| Bra007181.1-P | Field mustard | plastid | 60.49 | 55.9 |
| CDY07764 | Canola | plastid | 57.75 | 55.88 |
| Bra000026.1-P | Field mustard | plastid | 57.75 | 55.88 |
| CDY59491 | Canola | cytosol | 57.14 | 55.29 |
| CDY41199 | Canola | plastid | 60.49 | 55.28 |
| CDX76183 | Canola | cytosol | 58.05 | 54.57 |
| CDY13155 | Canola | cytosol | 58.05 | 54.57 |
| AT3G53940.1 | Thale cress | cytosol | 60.18 | 54.25 |
| Bra014855.1-P | Field mustard | cytosol | 58.36 | 53.63 |
| CDY18420 | Canola | plastid | 56.23 | 53.62 |
| CDX93344 | Canola | plastid | 56.23 | 53.62 |
| Bra017151.1-P | Field mustard | plastid | 55.93 | 53.33 |
| AT2G37890.1 | Thale cress | cytosol | 54.1 | 52.82 |
| TraesCS3B01G238400.1 | Wheat | cytosol, plastid, vacuole | 22.19 | 30.8 |
| TraesCS1B01G459400.1 | Wheat | cytosol | 32.52 | 30.23 |
| TraesCS3B01G280800.1 | Wheat | cytosol, mitochondrion, plastid | 30.7 | 29.97 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 29.18 | 28.66 |
| TraesCS5B01G299100.1 | Wheat | plastid | 26.75 | 27.67 |
| TraesCS3B01G211500.1 | Wheat | golgi | 30.4 | 25.71 |
| TraesCS6B01G210000.1 | Wheat | plastid | 30.09 | 23.08 |
| TraesCS1B01G135400.1 | Wheat | cytosol | 28.57 | 22.82 |
| TraesCS7B01G401600.1 | Wheat | cytosol | 27.36 | 21.23 |
| TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 32.52 | 20.78 |
| TraesCS4B01G306400.1 | Wheat | peroxisome | 25.84 | 20.24 |
| TraesCS3B01G493000.1 | Wheat | cytosol | 24.62 | 20.0 |
| TraesCS5B01G274300.1 | Wheat | cytosol | 23.4 | 20.0 |
| TraesCS7B01G138400.1 | Wheat | cytosol | 22.49 | 19.89 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G070700.1 | EnsemblPlantsGene:TraesCS3B01G070700 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF403 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:42629270..42632705
Molecular Weight (calculated)
35484.9 Da
IEP (calculated)
9.921
GRAVY (calculated)
0.001
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTEARVGGV GLDGRGAVSA SPRQEQQQRH IGTAAHLAAG GFAGVVSKTC TAPLARLTIL FQVAGMHSDA AALRKCSILH EASRIVREEG FGAFWKGNLV
101: TIVHRLPYSA MSFYSYERYK KLLGMVPGLD DPNYVSVVRL LGGGLAGVTA ASVTYPLDVV RTRLATQKTT RYYKGIFHTL STICREESGR GLYKGLGATL
201: LGVGPGIAIS FYVYESLRSH WQMERPNDSN AVVSLFSGSL SGIAASTATF PLDLVKRRMQ LHGAAGTSQI EKSSITGTIR QILQKEGPRG FYRGIVPEYL
301: KVVPSVGIAF MTYEVLKSML SSIDGDDEN
101: TIVHRLPYSA MSFYSYERYK KLLGMVPGLD DPNYVSVVRL LGGGLAGVTA ASVTYPLDVV RTRLATQKTT RYYKGIFHTL STICREESGR GLYKGLGATL
201: LGVGPGIAIS FYVYESLRSH WQMERPNDSN AVVSLFSGSL SGIAASTATF PLDLVKRRMQ LHGAAGTSQI EKSSITGTIR QILQKEGPRG FYRGIVPEYL
301: KVVPSVGIAF MTYEVLKSML SSIDGDDEN
001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL
Arabidopsis Description
Ca-dependent solute carrier-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M058]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.