Factsheet for Zm00001d039884_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00336	Sorghum	cytosol	94.21	93.64
Os01t0143100-01	Rice	mitochondrion	87.8	89.44
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	82.62	82.37
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	82.62	82.37
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	82.62	82.37
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	83.23	73.39
KRH49196	Soybean	endoplasmic reticulum	56.1	66.91
KRH73096	Soybean	cytosol	66.46	66.67
Zm00001d047838_P001	Maize	cytosol	69.21	66.18
VIT_08s0007g01280.t01	Wine grape	cytosol	66.77	65.18
KRH15037	Soybean	cytosol	64.63	65.03
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	65.55	64.56
KRH00061	Soybean	cytosol	65.24	64.46
PGSC0003DMT400062351	Potato	cytosol	66.77	62.22
VIT_13s0019g02440.t01	Wine grape	cytosol	67.99	61.77
AT3G55640.4	Thale cress	plastid	62.2	61.45
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	66.46	61.41
CDY40244	Canola	plastid	61.28	60.0
Bra000026.1-P	Field mustard	plastid	60.06	57.94
CDY07764	Canola	plastid	60.06	57.94
CDY59491	Canola	cytosol	59.45	57.35
CDY13155	Canola	cytosol	60.98	57.14
CDX76183	Canola	cytosol	60.98	57.14
Bra007181.1-P	Field mustard	plastid	61.28	56.46
Bra014855.1-P	Field mustard	cytosol	61.28	56.15
AT3G53940.1	Thale cress	cytosol	62.2	55.89
CDY41199	Canola	plastid	61.28	55.83
CDY18420	Canola	plastid	58.23	55.36
CDX93344	Canola	plastid	58.23	55.36
Bra017151.1-P	Field mustard	plastid	58.23	55.36
AT2G37890.1	Thale cress	cytosol	56.1	54.6
Zm00001d049104_P001	Maize	cytosol, mitochondrion, plastid	18.9	32.63
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	31.71	31.04
Zm00001d011226_P002	Maize	plastid	31.1	30.0
Zm00001d011697_P001	Maize	peroxisome	29.88	29.52
Zm00001d028008_P001	Maize	mitochondrion	20.73	25.09
Zm00001d040351_P005	Maize	mitochondrion	29.57	23.89
Zm00001d009799_P001	Maize	plastid	28.96	23.4
Zm00001d042213_P004	Maize	cytosol, plastid	26.52	22.54
Zm00001d037640_P001	Maize	plastid	27.13	21.92
Zm00001d046400_P002	Maize	mitochondrion	27.74	21.67
Zm00001d053640_P001	Maize	plasma membrane	34.76	21.55
Zm00001d015746_P001	Maize	plastid	28.35	21.28
Zm00001d011918_P002	Maize	cytosol	25.3	20.75
Zm00001d020980_P001	Maize	cytosol	23.48	20.59
Zm00001d052515_P001	Maize	cytosol	9.15	20.55
Zm00001d031527_P001	Maize	cytosol	23.78	20.53
Zm00001d046509_P002	Maize	plastid	34.45	20.47
Zm00001d028009_P001	Maize	peroxisome	25.91	20.0
Zm00001d048218_P001	Maize	endoplasmic reticulum	26.22	19.86
Zm00001d022406_P002	Maize	cytosol	23.17	19.64
Zm00001d014331_P001	Maize	cytosol	9.76	19.05
Zm00001d009318_P001	Maize	cytosol	6.4	18.58
Zm00001d014170_P001	Maize	cytosol	9.15	15.62

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A1D6MLK5	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	ProteinID:ONM30093.1	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	SUPFAM:SSF103506	UniParc:UPI00084290F6	EnsemblPlantsGene:Zm00001d039884	EnsemblPlants:Zm00001d039884_P002
EnsemblPlants:Zm00001d039884_T002	SEG:seg	:	:	:	:

Description

Mitochondrial substrate carrier family protein

Coordinates

chr3:+:17599025..17603565

Molecular Weight (calculated)

35417.8 Da

IEP (calculated)

9.767

GRAVY (calculated)

0.071

Length

328 amino acids

Sequence
(BLAST)

001: MQTEARVGVV VDGGAAVGRC QEQRHIGTAA HLAAGGFAGA VSKTCTAPLA RLTILFQVAG MHSDVATLRK CSIWHEASRI FREEGIEAFW KGNLVTIVHR
101: LPYSAISFYS YERYKNLLQT VPGLDRDSNN VGVVRLLGGG LAGITAASLT YPLDVVRTRL ATQKTTRYYK GIFHAVSTIC RDEGVKGLYK GLGATLLKLQ
201: GVGPSIAISF SVYESLRSYW QMERPHDSTA VVSLFSGSLS GIASSTATFP LDLVKRRMQL QGAAGTASVQ KSTISGTVRD ILQREGLRGF YRGIAPEYLK
301: VVPSVGIAFM TYETLKGLLS SIDIDDES

Best Arabidopsis Sequence Match ( AT3G55640.4 )
(BLAST)

001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL

Arabidopsis Description

Ca-dependent solute carrier-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M058]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.