CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 3
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15037	Soybean	cytosol	94.8	95.09
KRH49196	Soybean	endoplasmic reticulum	62.08	73.82
KRH00061	Soybean	cytosol	73.7	72.59
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	72.17	70.87
AT3G55640.4	Thale cress	plastid	71.87	70.78
CDY40244	Canola	plastid	71.87	70.15
VIT_13s0019g02440.t01	Wine grape	cytosol	77.06	69.81
GSMUA_Achr10P...	Banana	cytosol	70.95	68.84
Os01t0143100-01	Rice	mitochondrion	65.75	66.77
GSMUA_Achr8P02430_001	Banana	cytosol	71.56	66.67
Zm00001d039884_P002	Maize	cytosol	66.67	66.46
EES00336	Sorghum	cytosol	66.67	66.06
Bra007181.1-P	Field mustard	plastid	71.87	66.01
Os03t0267700-01	Rice	cytosol	69.42	65.61
CDY41199	Canola	plastid	72.17	65.56
HORVU4Hr1G060540.1	Barley	cytosol	68.5	65.5
TraesCS4B01G211000.1	Wheat	plastid	66.97	65.37
Zm00001d047838_P001	Maize	cytosol	68.5	65.31
TraesCS4A01G093400.1	Wheat	cytosol	68.2	65.2
OQU92863	Sorghum	cytosol	68.81	65.03
TraesCS4D01G211700.2	Wheat	cytosol	68.2	65.01
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	64.83	64.44
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	64.83	64.44
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	64.22	63.83
OQU92679	Sorghum	cytosol	24.16	63.71
GSMUA_Achr6P33950_001	Banana	plastid	73.7	60.25
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	65.14	57.26
KRH27854	Soybean	cytosol	33.95	33.64
KRH77631	Soybean	cytosol	33.64	33.33
KRG97138	Soybean	cytosol	34.25	32.46
KRH68888	Soybean	cytosol	33.95	32.17
KRH49045	Soybean	cytosol	30.89	31.27
KRH47947	Soybean	mitochondrion	33.64	30.99
KRH06509	Soybean	cytosol	33.64	30.99
KRH15889	Soybean	endoplasmic reticulum	22.32	30.54
KRH61524	Soybean	cytosol	28.44	27.43
KRH52207	Soybean	cytosol	28.13	27.22
KRH37122	Soybean	cytosol	26.61	26.52
KRH12112	Soybean	cytosol	25.99	25.91
KRH50868	Soybean	cytosol	25.69	25.38
KRH02242	Soybean	cytosol	25.08	25.08
KRH75891	Soybean	cytosol, peroxisome	14.68	24.87
KRH65751	Soybean	plastid	29.05	24.74
KRH49367	Soybean	plastid	28.13	24.08
KRH61786	Soybean	cytosol, nucleus, plastid	28.75	24.04
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	23.24	23.97
KRH52458	Soybean	extracellular	28.44	23.79
KRG94737	Soybean	cytosol	33.95	23.27
KRH06795	Soybean	cytosol	33.64	23.26
KRH62352	Soybean	cytosol, peroxisome, plastid	29.05	22.84
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	28.75	22.6
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	27.52	22.0
KRH70079	Soybean	cytosol	32.42	21.95
KRH63894	Soybean	cytosol	30.89	21.58
KRH43178	Soybean	plastid	26.91	21.2
KRH54061	Soybean	cytosol	30.28	20.8
KRH05133	Soybean	mitochondrion	26.3	20.57
KRH41046	Soybean	cytosol	30.89	20.53
KRH59718	Soybean	cytosol	30.58	20.0
KRH44680	Soybean	extracellular	20.18	17.46
KRH46981	Soybean	plastid	19.88	17.06

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100813211	MapMan:24.2.13	EMBL:ACUP02001265	EnsemblPlantsGene:GLYMA_02G251900	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:I1JI34	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH73096
ProteinID:KRH73096	ProteinID:KRH73096.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	SUPFAM:SSF103506	UniParc:UPI0002336C05
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:43907220..43911596

Molecular Weight (calculated)

35538.1 Da

IEP (calculated)

9.941

GRAVY (calculated)

0.093

Length

327 amino acids

Sequence
(BLAST)

001: MQMEARVGVA VDGGGVRKLV QPPPPKHIGT VSQLLAGGVA GAFSKSCTAP LARLTILFQI QGMHSNVATL RKASIWNEAS RIIHEEGFGA FWKGNLVTIA
101: HRLPYSSVNF YSYEHYKKLL KMVPGLQSHR DNVSADLCVH FVGGGLAGVT AATTTYPLDL VRTRLAAQTN FTYYRGIWHA LHTISKEEGI FGLYKGLGTT
201: LLTVGPSIAI SFSVYETLRS YWQSNRSDDS PAVVSLACGS LSGIASSTAT FPLDLVRRRK QLEGAGGRAR VYTTGLYGVF RHIIQTEGVR GLYRGILPEY
301: YKVVPGVGIC FMTYETLKML LADIGTA

Best Arabidopsis Sequence Match ( AT3G55640.4 )
(BLAST)

001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL

Arabidopsis Description

Ca-dependent solute carrier-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M058]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.