CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, peroxisome
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75891	Soybean	cytosol, peroxisome	41.64	68.39
Zm00001d049104_P001	Maize	cytosol, mitochondrion, plastid	37.85	63.16
KRH49367	Soybean	plastid	72.24	59.95
GSMUA_Achr11P...	Banana	extracellular	18.93	59.41
KRH65751	Soybean	plastid	65.62	54.17
GSMUA_Achr11P...	Banana	cytosol	20.19	50.79
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	58.36	48.56
PGSC0003DMT400030778	Potato	cytosol, peroxisome, plastid	57.73	48.16
Solyc09g005250.2.1	Tomato	plastid	57.41	47.89
Bra033473.1-P	Field mustard	plastid	55.2	45.93
CDY23168	Canola	plastid	55.2	45.93
AT3G51870.1	Thale cress	plastid	54.89	45.67
CDX95305	Canola	plastid	54.89	45.67
GSMUA_Achr9P03630_001	Banana	mitochondrion	53.94	45.36
Os01t0265200-01	Rice	plastid	53.31	44.36
TraesCS3B01G211500.1	Wheat	golgi	53.94	43.96
TraesCS3A01G181500.1	Wheat	golgi	54.26	43.88
TraesCS3D01G186300.1	Wheat	mitochondrion	53.94	43.62
EES02734	Sorghum	mitochondrion	52.05	41.25
Zm00001d040351_P005	Maize	mitochondrion	52.05	40.64
HORVU3Hr1G037170.3	Barley	plastid	53.94	40.33
KRH15889	Soybean	endoplasmic reticulum	21.14	28.03
KRH49196	Soybean	endoplasmic reticulum	20.82	24.0
KRH27854	Soybean	cytosol	24.29	23.33
KRH77631	Soybean	cytosol	24.29	23.33
KRH73096	Soybean	cytosol	23.97	23.24
KRH00061	Soybean	cytosol	24.29	23.19
KRH15037	Soybean	cytosol	23.66	23.01
KRG97138	Soybean	cytosol	24.92	22.9
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	23.97	22.82
KRH52207	Soybean	cytosol	24.29	22.78
KRH68888	Soybean	cytosol	24.61	22.61
KRH61524	Soybean	cytosol	23.66	22.12
KRH47947	Soybean	mitochondrion	24.61	21.97
KRH06509	Soybean	cytosol	24.61	21.97
KRH12112	Soybean	cytosol	21.45	20.73
KRH49045	Soybean	cytosol	20.82	20.43
KRH37122	Soybean	cytosol	21.14	20.43
KRH52458	Soybean	extracellular	24.92	20.2
KRH02242	Soybean	cytosol	20.5	19.88
KRH61786	Soybean	cytosol, nucleus, plastid	24.29	19.69
KRH50868	Soybean	cytosol	20.5	19.64
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	24.92	19.32
KRH62352	Soybean	cytosol, peroxisome, plastid	23.66	18.03
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	23.34	17.79
KRH05133	Soybean	mitochondrion	23.34	17.7
KRH44680	Soybean	extracellular	20.19	16.93
KRH46981	Soybean	plastid	20.19	16.8
KRH43178	Soybean	plastid	20.5	15.66
KRH63894	Soybean	cytosol	20.5	13.89
KRH54061	Soybean	cytosol	20.19	13.45
KRG94737	Soybean	cytosol	20.19	13.42
KRH06795	Soybean	cytosol	19.87	13.32
KRH41046	Soybean	cytosol	20.5	13.21
KRH59718	Soybean	cytosol	20.82	13.2
KRH70079	Soybean	cytosol	19.56	12.84

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A0R0F1Z4	EMBL:ACUP02011407	EnsemblPlantsGene:GLYMA_18G200400	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	EnsemblPlants:KRH00225	ProteinID:KRH00225	ProteinID:KRH00225.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF619
SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0006EDF12C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:-:47975284..47980421

Molecular Weight (calculated)

35359.0 Da

IEP (calculated)

10.008

GRAVY (calculated)

-0.065

Length

317 amino acids

Sequence
(BLAST)

001: MTKKEDQKES KHPIVIKRKI SNVNLILRLM ACGLGKNSAK KAISFIQAIA VIGKEEGIQG YWKGNLPQVI RVVPYSAVQL FAYEIYKVTP NYSIRSSNGK
101: YYLFMSEYLL LDSQKIFRGE NGRLSVAGRL AAGAFAGMTS TFITYPLDVL RLRLAVEPGY WTIMLREEGF AFFYRGLGSS LIAIAPYIAV NFCVFDLLKK
201: SLPEKYQKRT ETSILTAVLS ASLATLTCYP LDTAKTDAIE GSHNDQIYTF VDAGIVARDG VAGLYRGFVP NALKSLPNSS IKLTTYGIVK RLITASEKEF
301: QTITEENRNK HKNTNNQ

Best Arabidopsis Sequence Match ( AT5G01500.1 )
(BLAST)

001: MGEEKSLLQF RSFPSLKTSD FALTEEPSWR LENNVSSNRR RGNKRSGGVF TNFASLSVAI RRDRRESTFN GRNGGGGGAF ASVSVVIPKE EDEFAPTSAQ
101: LLKNPIALLS IVPKDAALFF AGAFAGAAAK SVTAPLDRIK LLMQTHGVRA GQQSAKKAIG FIEAITLIGK EEGIKGYWKG NLPQVIRIVP YSAVQLFAYE
201: TYKKLFRGKD GQLSVLGRLG AGACAGMTST LITYPLDVLR LRLAVEPGYR TMSQVALNML REEGVASFYN GLGPSLLSIA PYIAINFCVF DLVKKSLPEK
301: YQQKTQSSLL TAVVAAAIAT GTCYPLDTIR RQMQLKGTPY KSVLDAFSGI IAREGVVGLY RGFVPNALKS MPNSSIKLTT FDIVKKLIAA SEKEIQRIAD
401: DNRKKASPNT IDEQT

Arabidopsis Description

TAACThylakoid ADP,ATP carrier protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.